PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.0556s0737.1.p
Organism
Boechera stricta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 335aa    MW: 37898.3 Da    PI: 7.0521
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.0556s0737.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.21.8e-13252304557
                          CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                          +r+rr++kNRe+A rsR+R++a++ eLe +  +L++eN++Lk+ +ee +k+ +
  Bostr.0556s0737.1.p 252 RRQRRMIKNRESAARSRARRQAYTVELELELNNLTEENTKLKQIVEENEKKRK 304
                          79****************************************99998888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.6E-9245321IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.795250302IPR004827Basic-leucine zipper domain
PfamPF001701.6E-11252304IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-9252301No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-12252304No hitNo description
PROSITE patternPS000360255270IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0033613Molecular Functionactivating transcription factor binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MSVFESETST FNVYNHDIQT QPQTFMQETA EEAPVGRQNS ILSLTLDEIQ TKSGKSLGAM  60
NMDEFLANLW TTVEENDNNG GGGGDHRNGE KPTTVLPRQG SLSLPVPLCK KTVDEVWLEI  120
QNGVQQHPPS STSGQNSDED IRRQQTLGEI TLEDFLVKAG VVQEPLKTTM RISSSDFGYN  180
PDFGVGLHCQ NQNNYGDNRS VYNENRPFYS VLGESSSCMT GNGRSHQYLT GLDAFRIKKR  240
IIDGPPEILM ERRQRRMIKN RESAARSRAR RQAYTVELEL ELNNLTEENT KLKQIVEENE  300
KKRKQEIINR SKQVTKEKNG DKLRRIRRMA SAGW*
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression during seed development. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBostr.0556s0737.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAJ4196000.0AJ419600.1 Arabidopsis thaliana mRNA for basic leucine zipper transcription factor (atbzip67 gene).
GenBankBT0029230.0BT002923.1 Arabidopsis thaliana clone RAFL15-01-K19 (R20103) putative bZIP protein (At3g44460) mRNA, complete cds.
GenBankBT0043420.0BT004342.1 Arabidopsis thaliana clone U20103 putative bZIP protein (At3g44460) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020882326.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 1
SwissprotQ8RYD60.0AI5L1_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 1
TrEMBLD7LNS00.0D7LNS0_ARALL; Uncharacterized protein
STRINGBostr.0556s0737.1.p0.0(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM116522230
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44460.10.0bZIP family protein