PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bostr.3148s0197.1.p
Organism
Boechera stricta
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera
Family bZIP
Protein Properties Length: 370aa    MW: 41329.6 Da    PI: 9.951
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bostr.3148s0197.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.97.1e-11293338455
                          XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
               bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                          +k +rrk+ NRe+A rsR+RK+a++ eLe + ++L++e k+L       k++
  Bostr.3148s0197.1.p 293 DKIQRRKIMNRESAARSRARKQAQTMELELELESLKKEYKELL------KQQ 338
                          6889***********************************9654......444 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.2E-6290354IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.358292337IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.44E-7294339No hitNo description
PfamPF001707.2E-8294337IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1708.8E-9295340No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 370 aa     Download sequence    Send to blast
MDSYWRLKNL VNDLPVSTPL SQQASIYPWT VDQFQTSLGK NCGSMNMDEL VKNISSAEET  60
QERLQRQGST FLPRTLSQKT VDDVWEYITQ EEHTTNNGVN NIPQIQRQKT LGETTLEELL  120
IRAGARGNNT NGGSIHDSSS VISGNPNTSL GVQFQEKAMV SDFMNYMVPR SHDSNLHQNV  180
NGSMSTYQPQ QSIMSKPNGY SYGKQIGFSN GKMGCFDQSL QEKKRSLIPS VSKIPSGAMA  240
CSPVTSFPIS NGIQKIDGES SLLSPSPYII NGSTSTRGRK IDNSIVAEKK VVDKIQRRKI  300
MNRESAARSR ARKQAQTMEL ELELESLKKE YKELLKQQVD TRKRQTEPGM INLQGGPERK  360
LRRTKSDIK*
Functional Description ? help Back to Top
Source Description
UniProtCould participate in abscisic acid-regulated gene expression. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBostr.3148s0197.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002865471.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 8
SwissprotQ9FMM70.0AI5L8_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 8
TrEMBLD7MQS10.0D7MQS1_ARALL; Predicted protein
STRINGBostr.3148s0197.1.p0.0(Boechera stricta)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM156311417
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42910.11e-161bZIP family protein