PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bostr.9345s0037.1.p

Organism

Boechera stricta

Taxonomic ID

72658

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Boechereae; Boechera

Family

bZIP

Protein Properties

Length: 726aa MW: 78581 Da PI: 6.2234

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bostr.9345s0037.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.9	5.1e-14	228	289	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 e++ k+ r+++NRe+A+ sRqRKk ++eeLeekv +L + ++L +++ e a+l+++ Bostr.9345s0037.1.p 228 EEDEKKKARLMRNRESAQLSRQRKKHYVEELEEKVRNLHSTITDLNGKISYFMAENATLRQQ 289 678899*******************************************9999999999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.7E-17	228	292	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	6.6E-12	229	290	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.576	230	290	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.06E-12	232	290	No hit	No description
Gene3D	G3DSA:1.20.5.170	2.5E-17	232	290	No hit	No description
CDD	cd14704	5.67E-22	233	284	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0042538	Biological Process	hyperosmotic salinity response
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 726 aa Download sequence Send to blast
MADPITEQPP PPAPDPNSTH PPPSDFDSIS IPPFDDHFYH SGSAQTPIGE LMSDLGFPDG 60 EFELTFDGMD DLYFPAENES FLIPVNASNQ EQFGDFTPES EGSGISGDCV VPKDADKSIT 120 TSGCCNRESP RDSDDRCSGA ERSLDLPTPL SSQGSGNCGS DVSEATNESS PKSGNVVVDQ 180 KVKVEEPATT TSITKRKKEI EEDLSDESRN SKYRRSGEDA DASAVTGEED EKKKARLMRN 240 RESAQLSRQR KKHYVEELEE KVRNLHSTIT DLNGKISYFM AENATLRQQL GGNGMCPPHH 300 PPPPMGMYPP MAPMPYPWMP CPPYMVKQQG SQVPLIPIPR LKPQNPLGTS KAKKSESKKS 360 EAKAKKVASI SFLGLLFCLF LFGALAPIVN VNYGGISGAF YGNYRSNYIT DQIYSQHRDR 420 VLDTSRSGAG TGVSNSNGMH CGRDSVRGTR KNISGTESSV PPGNGSEPLV ASLFVPRNDK 480 LVKIDGNLII NSILASEKAV ASRKASESNE RNADLVIPKD YSPALPLPDV GRTEEMAKHL 540 YRSNTEKQKA LSSGSADSLK DQFKTKAANG EMQQWFREGV AGPMFSSGMC TEVFQFDVSS 600 TSGAIIPASP ATNVSAEHGK NTTDTHKRKN RRILRGLPIP LPGSDFNLTK EHQRNSSSKE 660 IKPASSMVVS VLVDPREGGD GDIDGMIGGP KSLSRVFVVV LLDSAKYVTY SCVLPRSGAP 720 YLVTT*

Sequence ? help Back to Top

Protein Sequence Length: 726 aa Download sequence Send to blast

MADPITEQPP PPAPDPNSTH PPPSDFDSIS IPPFDDHFYH SGSAQTPIGE LMSDLGFPDG  60
EFELTFDGMD DLYFPAENES FLIPVNASNQ EQFGDFTPES EGSGISGDCV VPKDADKSIT  120
TSGCCNRESP RDSDDRCSGA ERSLDLPTPL SSQGSGNCGS DVSEATNESS PKSGNVVVDQ  180
KVKVEEPATT TSITKRKKEI EEDLSDESRN SKYRRSGEDA DASAVTGEED EKKKARLMRN  240
RESAQLSRQR KKHYVEELEE KVRNLHSTIT DLNGKISYFM AENATLRQQL GGNGMCPPHH  300
PPPPMGMYPP MAPMPYPWMP CPPYMVKQQG SQVPLIPIPR LKPQNPLGTS KAKKSESKKS  360
EAKAKKVASI SFLGLLFCLF LFGALAPIVN VNYGGISGAF YGNYRSNYIT DQIYSQHRDR  420
VLDTSRSGAG TGVSNSNGMH CGRDSVRGTR KNISGTESSV PPGNGSEPLV ASLFVPRNDK  480
LVKIDGNLII NSILASEKAV ASRKASESNE RNADLVIPKD YSPALPLPDV GRTEEMAKHL  540
YRSNTEKQKA LSSGSADSLK DQFKTKAANG EMQQWFREGV AGPMFSSGMC TEVFQFDVSS  600
TSGAIIPASP ATNVSAEHGK NTTDTHKRKN RRILRGLPIP LPGSDFNLTK EHQRNSSSKE  660
IKPASSMVVS VLVDPREGGD GDIDGMIGGP KSLSRVFVVV LLDSAKYVTY SCVLPRSGAP  720
YLVTT*

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator involved in salt and osmotic stress responses. Functions as a stress sensor and transducer in a signaling pathway that resembles an ER stress response. Following salt stress, BZIP17 is cleaved by SBT6.1 (S1P) and S2P at the C-terminus and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression of salt stress response genes (PubMed:17662035). Functions as a stress sensor and transducer in ER stress signaling pathway. ER stress induces proteolysis of BZIP17 by SBT6.1 (S1P) and S2P, and the N-terminal bZIP component is translocated to the nucleus, where it activates the expression and production of ER chaperones, as well as protein involved in brassinosteroid (BR) signaling, which is required for stress acclimation and growth (PubMed:20876872). {ECO:0000269\|PubMed:17662035, ECO:0000269\|PubMed:20876872}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Bostr.9345s0037.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AY136295	0.0	AY136295.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds.
GenBank	BT000408	0.0	BT000408.1 Arabidopsis thaliana putative TGACG-sequence-specific bZIP DNA-binding protein (At2g40950) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_002881751.1	0.0	bZIP transcription factor 17
Swissprot	O22208	0.0	BZP17_ARATH; bZIP transcription factor 17
TrEMBL	D7LGH5	0.0	D7LGH5_ARALL; BZIP transcription factor family protein
STRING	Bostr.9345s0037.1.p	0.0	(Boechera stricta)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Malvids	OGEM8881	27	37

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40950.1	0.0	bZIP family protein

Link Out ? help Back to Top
Phytozome	Bostr.9345s0037.1.p

Publications ? help Back to Top
Zhou SF, et al. Membrane-associated transcription factor peptidase, site-2 protease, antagonizes ABA signaling in Arabidopsis. New Phytol., 2015. 208(1): p. 188-97 [PMID:25919792] Sagor GH, et al. The polyamine spermine induces the unfolded protein response via the MAPK cascade in Arabidopsis. Front Plant Sci, 2015. 6: p. 687 [PMID:26442007] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470] Kim JS,Yamaguchi-Shinozaki K,Shinozaki K ER-Anchored Transcription Factors bZIP17 and bZIP28 Regulate Root Elongation. Plant Physiol., 2018. 176(3): p. 2221-2230 [PMID:29367234] Cifuentes-Esquivel N, et al. bZIP17 regulates the expression of genes related to seed storage and germination, reducing seed susceptibility to osmotic stress. J. Cell. Biochem., 2018. 119(8): p. 6857-6868 [PMID:29693271] Guan P, et al. SENSITIVE TO SALT1, An Endoplasmic Reticulum-Localized Chaperone, Positively Regulates Salt Resistance. Plant Physiol., 2018. 178(3): p. 1390-1405 [PMID:30287478]