PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g01695.1.p
Common NameBRADI_1g01695
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 268aa    MW: 29740.4 Da    PI: 8.8836
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g01695.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM55.12.5e-1731432127
               NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk........kvkaeekewyfFskrdkkyatgkrknra.....tksg 81 
                       +pG+ F+P+++el +  L  k++g   ++  +i+ +d+y+++P++L k            +e ewyfFs+ + ++++++  +ra      ++ 
  Bradi1g01695.1.p   3 APGCTFEPSEQELTDVCLYGKITGAGRDV-GAIHVADVYSADPETLAKsfapapgtGRGDKEPEWYFFSPVRYASKKKNSGRRAriigcDSNK 94 
                       69************************999.89**************85577777532222445******988777665555554233333356 PP

               NAM  82 yWkatgkdkevlskkgelvglkktLvfy.....kgrapkgektdWvmheyr 127
                        W++     +v   ++++ g k  L++      +g+++k e++ W++ e+ 
  Bradi1g01695.1.p  95 KWHSEIGAVPVE--GSAVGGHKVNLTYMvrsnaSGEKKKHERAGWILAEFG 143
                       799887766665..588999*******99888879999999********95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100522.1892161IPR003441NAC domain
SuperFamilySSF1019413.14E-193160IPR003441NAC domain
PfamPF023651.4E-94143IPR003441NAC domain
Gene3DG3DSA:3.60.21.102.3E-10177255IPR029052Metallo-dependent phosphatase-like
SuperFamilySSF563003.29E-5197239IPR029052Metallo-dependent phosphatase-like
PfamPF140089.3E-12198244IPR025733Iron/zinc purple acid phosphatase-like C-terminal domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    Send to blast
MAAPGCTFEP SEQELTDVCL YGKITGAGRD VGAIHVADVY SADPETLAKS FAPAPGTGRG  60
DKEPEWYFFS PVRYASKKKN SGRRARIIGC DSNKKWHSEI GAVPVEGSAV GGHKVNLTYM  120
VRSNASGEKK KHERAGWILA EFGIAPEHGG GQLELCKLHR SPHFQETAAG SKKRKAAAAD  180
ELYSADRCKN LCLRQEMPQD RPRPEYSAYR ESSFGHGILQ VKNETHALWQ WHRNQDVYNS  240
VGDEIFIVRE SHRCLRNCSR PAHHRQP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g01695.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229407.11e-150NAC domain-containing protein 53
TrEMBLA0A0Q3RFU40.0A0A0Q3RFU4_BRADI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2274024
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02450.22e-10NAC domain containing protein 35