PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g04510.3.p
Common NameBRADI_1g04510
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 335aa    MW: 35384 Da    PI: 6.8926
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g04510.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1734.4e-23219281163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elkrerrkq NR +ArrsR+RK++e+eeL++kv eL+a N  Lk+e+++lkk ++ +++e+
  Bradi1g04510.3.p 219 ERELKRERRKQANRDSARRSRLRKQQECEELAQKVTELTAINGVLKSEIDQLKKDCEDMEAEN 281
                       89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.9E-16213278No hitNo description
PfamPF001706.2E-21219281IPR004827Basic-leucine zipper domain
SMARTSM003381.5E-19219283IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.553221284IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.06E-10222277No hitNo description
CDDcd147022.48E-18224274No hitNo description
PROSITE patternPS000360226241IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 335 aa     Download sequence    Send to blast
MAASSSSVTS GDNGPPNGGN GTPPPPIHGD WASSMQAYYV AVSVAGHHPY AAWPPPPQGA  60
PYMVGEAASA VTVEGNNRKR KTTRVPSGDD ASDDDGSQGS SAKTAPGADP DQKFVQGSSS  120
AKRRKSPGAA NTEGEPSQAA TTMMHNAVTE APFMGKGRSA SKLSVLAPGR VARTNAIPNL  180
NIGMGHSNTS SSTMMPSGQG EVNVGASSQS NGSLSRMDER ELKRERRKQA NRDSARRSRL  240
RKQQECEELA QKVTELTAIN GVLKSEIDQL KKDCEDMEAE NTQLMDEVLT HDDEMLESED  300
PSVLTTLSIQ VDVLTARRGR NSKLHKSNND VSKG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235241RRSRLRK
2235242RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g04510.3.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024312498.10.0DNA-binding protein EMBP-1
SwissprotP250321e-89EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A0Q3JK590.0A0A0Q3JK59_BRADI; Uncharacterized protein
STRINGBRADI1G04510.10.0(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.18e-26basic region/leucine zipper transcription factor 16