PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g04510.5.p
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 368aa    MW: 38914.1 Da    PI: 7.1285
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g04510.5.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_172.65.8e-23252314163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       e+elkrerrkq NR +ArrsR+RK++e+eeL++kv eL+a N  Lk+e+++lkk ++ +++e+
  Bradi1g04510.5.p 252 ERELKRERRKQANRDSARRSRLRKQQECEELAQKVTELTAINGVLKSEIDQLKKDCEDMEAEN 314
                       89*********************************************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1704.9E-16246311No hitNo description
PfamPF001701.5E-20252314IPR004827Basic-leucine zipper domain
SMARTSM003381.5E-19252316IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.553254317IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.5E-10255309No hitNo description
CDDcd147022.73E-19257307No hitNo description
PROSITE patternPS000360259274IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MAASSSSVTS GDNGPPNGGN GTPPPPIHGD WASSMQAYYV AVSVAGHHPY AAWPPPPQQH  60
GLMAPGPAYG VPVPFPMYHH PAYYAHAPMA AGAPYMVGEA ASAVTVEGNN RKRKTTRVPS  120
GDDASDDDGS QGSSAKTAPG ADPDQKFVQG SSSAKRRKSP GAANTEGEPS QAATTMMHNA  180
VTEAPFMGKG RSASKLSVLA PGRVARTNAI PNLNIGMGHS NTSSSTMMPS GQGEVNVGAS  240
SQSNGSLSRM DERELKRERR KQANRDSARR SRLRKQQECE ELAQKVTELT AINGVLKSEI  300
DQLKKDCEDM EAENTQLMDE VLTHDDEMLE SEDPSVLTTL SIQVDVLTAR RGRNSKLHKS  360
NNDVSKG*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1268274RRSRLRK
2268275RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtInteracts specifically with the 8-bp sequence 5'-CACGTGGC-3'in the abscisic acid response element (ABARE). Also binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g04510.5.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024312498.10.0DNA-binding protein EMBP-1
SwissprotP250327e-97EMBP1_WHEAT; DNA-binding protein EMBP-1
TrEMBLA0A2K2DI470.0A0A2K2DI47_BRADI; Uncharacterized protein
STRINGBRADI1G04510.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-25basic region/leucine zipper transcription factor 16