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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Bradi1g24390.3.p |
| Common Name | BRADI_1g24390 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
|
| Family |
NAC |
| Protein Properties |
Length: 261aa MW: 27334.4 Da PI: 8.1783 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi1g24390.3.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 39.7 | 1.5e-12 | 7 | 38 | 97 | 128 |
NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128
+e+vg+kk Lvfy+g+ pkg kt+W+mheyrl
Bradi1g24390.3.p 7 REKVGVKKALVFYRGKPPKGLKTNWIMHEYRL 38
578***************************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 261 aa
Download sequence Send
to blast |
MASGCAREKV GVKKALVFYR GKPPKGLKTN WIMHEYRLAD SSSSGATASR PPPVVAGGSG 60
GRAASLRLDD WVLCRIYKKI NKAAAGDQQR SMECEDSVED AVAAYHPSSY AMAGMVGAGA 120
HGGSNNNYTS LLHHHHHHHD SHEDNFLDGL LTVTEDHAGL SAGGTSLQSH LAAASRASLP 180
TAATKQLLAP PSSSATPFNR LHASTAVGIL PQDASTYHQQ HVILGTTSLP VPPESTVSGA 240
ASAFQQQQHP VQISGVNWNP *
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 6e-18 | 8 | 79 | 112 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 6e-18 | 8 | 79 | 112 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 6e-18 | 8 | 79 | 112 | 165 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 6e-18 | 8 | 79 | 112 | 165 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 3swm_B | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 3swm_C | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 3swm_D | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 3swp_A | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 3swp_B | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 3swp_C | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 3swp_D | 7e-18 | 8 | 79 | 115 | 168 | NAC domain-containing protein 19 |
| 4dul_A | 6e-18 | 8 | 79 | 112 | 165 | NAC domain-containing protein 19 |
| 4dul_B | 6e-18 | 8 | 79 | 112 | 165 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor of the NAC family associated with the grain protein content (GPC). Accelerates senescence and increases nutrient remobilization from leaves to developing grains. The tetraploid cultivated wheat (T.durum) contains one additional gene coding for a functional protein (NAM-A1) and one extra pseudogene (NAM-B1) (PubMed:17124321). Plays a weaker role in terminal senescence than NAM-A1. {ECO:0000269|PubMed:17124321, ECO:0000269|PubMed:22278768}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KM820888 | 3e-98 | KM820888.1 Triticum aestivum cultivar Chinese Spring NAC transcription factor NAM-B2 (NAM-B2) mRNA, complete cds. |
