PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g35552.1.p
Common NameLOC104582141
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 178aa    MW: 18991.8 Da    PI: 8.36
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g35552.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1301.1e-0981132152
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                       e++++++rr+++NRe+ArrsR R++ +++eL   ++eL a N++L   l++ 
  Bradi1g35552.1.p  81 EEARRKARRLASNRESARRSRVRRRRQLDELSACAAELRADNQRLVVALNRA 132
                       68899****************************************8877775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-481145IPR004827Basic-leucine zipper domain
PfamPF001702.0E-681130IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1707.9E-681132No hitNo description
PROSITE profilePS502179.30183125IPR004827Basic-leucine zipper domain
SuperFamilySSF579596.75E-685133No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 178 aa     Download sequence    Send to blast
MQRDLASLAC YSSAAGAASF FLPQAQQQPG SSSSDVVVDG LLGSVSVGGH GHGHHGPQCS  60
GGAGASWRAA GAPVDVAGSC EEARRKARRL ASNRESARRS RVRRRRQLDE LSACAAELRA  120
DNQRLVVALN RAEARHARVV RENQRLREEA RRLRERLGES GDDDEEDEEE AAAGRAP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
183105RRKARRLASNRESARRSRVRRRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g35552.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229791.11e-119bZIP transcription factor 44
TrEMBLI1GX531e-118I1GX53_BRADI; Uncharacterized protein
STRINGBRADI1G35550.11e-119(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP127422735