PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g35790.1.p
Common NameBRADI_1g35790, LOC100823661
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 293aa    MW: 31729.8 Da    PI: 4.4619
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g35790.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.36.2e-12132178450
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                       +k+ +r ++NR +A +sR+RKk +++ Le k+k Leae ++L   l+
  Bradi1g35790.1.p 132 SKKKKRQMRNRDSAMKSRERKKTYVKDLEVKSKYLEAECRRLSYALQ 178
                       699***********************************999987666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.6E-4128193IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.393131173IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.81E-10133191No hitNo description
PfamPF001701.0E-9133184IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-11133192No hitNo description
CDDcd147042.63E-14134184No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    Send to blast
MDADLDLDAL LASFDGESAI SSLFPPPPPD AEAGSPESVS SRSNPAGEEV LSEIERFLME  60
EEAAEAEGVE GISVEEFFDA LFDGAEGAEK AKESEAGGST DGDSGREEER VEVLTPETEV  120
DVEKVDGDDP ISKKKKRQMR NRDSAMKSRE RKKTYVKDLE VKSKYLEAEC RRLSYALQCC  180
AAENVALRQS MLKDRPVGAP TAMQESAVLT ETLPLVSLLW LVSIVCLFLT PGLPNQSPVA  240
PRSVGRDLVM VAGKLSSDQP ETLELLLHGR RHRGKRGRMK LDALPFHAAA AA*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g35790.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563606.10.0bZIP transcription factor 50
SwissprotQ69XV01e-108BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLI1GX840.0I1GX84_BRADI; Uncharacterized protein
STRINGBRADI1G35790.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69343750
Representative plantOGRP54681518
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.11e-12basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  2. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]