PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g36236.4.p
Common NameBRADI_1g36236, LOC100832625
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family G2-like
Protein Properties Length: 248aa    MW: 27300.4 Da    PI: 5.0449
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g36236.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like30.86.4e-101203655
           G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                      m+v+gLt+ hvkSHLQkYRl
  Bradi1g36236.4.p  1 MGVQGLTICHVKSHLQKYRL 20
                      99*****************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.0E-8121IPR009057Homeodomain-like
PfamPF143794.2E-215298IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 248 aa     Download sequence    Send to blast
MGVQGLTICH VKSHLQKYRL SKYIPDPTAD GAKSDKKELG NLLAGIESSP GMELSEALKL  60
QMEVQKRLRD QLEVQRQLQL RIEAQGKYLQ KIMEEQQRLT GVLCESGTLN ALVPVQELRQ  120
DFNKTDPLTP VPTSEPLIRD KASTVSDDHE GTDGLLKDLS SHDECHSSGR EPLTPDSSCG  180
AASPLDIPRD RLDHQNSESV LHHNILESRS GSDFQQASSV FPSSTRRSDS PAALYVSEDD  240
FKNSPDV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g36236.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563637.11e-180myb family transcription factor PHL7 isoform X2
RefseqXP_014754863.11e-180myb family transcription factor PHL7 isoform X2
RefseqXP_024312888.11e-180myb family transcription factor PHL7 isoform X2
SwissprotQ9SJW01e-61PHL7_ARATH; Myb family transcription factor PHL7
TrEMBLA0A2K2DN001e-180A0A2K2DN00_BRADI; Uncharacterized protein
TrEMBLI1GXE01e-179I1GXE0_BRADI; Uncharacterized protein
STRINGBRADI1G36236.11e-180(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01060.21e-64G2-like family protein