PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi1g43661.1.p
Common NameBRADI_1g43661, LOC100833756
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 207aa    MW: 23110.7 Da    PI: 6.6352
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi1g43661.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.54.3e-1192148359
                       XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                       e +r rr ++NRe+ArrsR RK++++ +L+  +++L   N++L ++l++    +a++
  Bradi1g43661.1.p  92 EERRKRRVASNRESARRSRVRKQKQLGQLRAQAAQLRDANRELLDRLNRAIRDCARV 148
                       56899*****************************************99988888765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-690146No hitNo description
SMARTSM003389.8E-790154IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.00292155IPR004827Basic-leucine zipper domain
PfamPF001709.6E-892143IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.13E-894143No hitNo description
CDDcd147022.88E-1295146No hitNo description
PROSITE patternPS00036097112IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    Send to blast
MNSGEVASVL LPPVVHFPPP DASTVSFEPH RYQYHQIAAA HDHFLFQYCH GFVDDEPFPL  60
DNPPPPAPAI RNNGSTTSSD EPAAGAERQR AEERRKRRVA SNRESARRSR VRKQKQLGQL  120
RAQAAQLRDA NRELLDRLNR AIRDCARVVR DNSRLREERA ELHRRLRELV VPVPVVDGDA  180
GVEVESSVAG IDEDDDESIM VAIATT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
193114RRKRRVASNRESARRSRVRKQK
2106112RRSRVRK
3106113RRSRVRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi1g43661.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7308970.0EU730897.1 Brachypodium distachyon clone BAC DB038O09, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229875.21e-147basic leucine zipper 43
TrEMBLA0A0Q3H6P31e-146A0A0Q3H6P3_BRADI; Uncharacterized protein
STRINGBRADI1G43660.11e-130(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Representative plantOGRP31041129