PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi2g04790.2.p
Common NameBRADI_2g04790, LOC104583031
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family BES1
Protein Properties Length: 170aa    MW: 18229.3 Da    PI: 10.6364
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi2g04790.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822133.81.8e-41451572113
            DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpleeaeaagssasaspess 93 
                       +s r+pt +ErEnn++RERrRR++a++iyaGLRa ++y+lpk+aD+n+Vl+ALc+eAG++v++DG++ r +g ++ +       s++  + ss
  Bradi2g04790.2.p  45 TSLRHPTPRERENNRQRERRRRQVATRIYAGLRARAGYALPKHADQNDVLRALCAEAGYLVDEDGNVSRlAGHQRSSGVGGPSGSSDHLQPSS 137
                       689******************************************************************878888855555566666666666 PP

            DUF822  94 lqsslkssalaspvesysas 113
                       ++ ++++ a + p ++++  
  Bradi2g04790.2.p 138 TSGATEAVAPQQPEPEQKHK 157
                       66566667766666666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.6E-3047139IPR008540BES1/BZR1 plant transcription factor, N-terminal
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    Send to blast
MEAAEGDVEA AAMAASAAGG RRGCIRSTRG PWTVRRQGRG GAVKTSLRHP TPRERENNRQ  60
RERRRRQVAT RIYAGLRARA GYALPKHADQ NDVLRALCAE AGYLVDEDGN VSRLAGHQRS  120
SGVGGPSGSS DHLQPSSTSG ATEAVAPQQP EPEQKHKISL ELTLSFTYM*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A7e-1313113337437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B7e-1313113337437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C7e-1313113337437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D7e-1313113337437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi2g04790.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0025231e-108AP002523.1 Oryza sativa Japonica Group genomic DNA, chromosome 1, PAC clone:P0013F10.
GenBankAP0149571e-108AP014957.1 Oryza sativa Japonica Group DNA, chromosome 1, cultivar: Nipponbare, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010232995.11e-120BES1/BZR1 homolog protein 2
TrEMBLA0A0Q3MEY91e-119A0A0Q3MEY9_BRADI; Uncharacterized protein
STRINGBRADI2G04790.13e-79(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Representative plantOGRP100841011
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.37e-16BES1 family protein