PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi2g06790.2.p
Common NameBRADI_2g06790
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 350aa    MW: 37723 Da    PI: 8.319
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi2g06790.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.44.9e-11187229547
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkk 47 
                       kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  
  Bradi2g06790.2.p 187 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSALSP 229
                       8999*********************************998875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.6E-14183247IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.76185241IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1706.8E-14187241No hitNo description
PfamPF001706.8E-10187237IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.48E-11187241No hitNo description
CDDcd147034.90E-23188238No hitNo description
PROSITE patternPS000360190205IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MAQLPPKIPT MAPAWPEFGG GHHHSARHHH HHQRSPSMGA FLAAPLPPLP LPPPAPAANG  60
AQQQQQPSWV DEFLDFSAAK RGAHRRTVSD SVAFLDDDNA GAGAAAHEFE RLDDAQLMSM  120
FSDDLTPPPP PQQPAAPSAS SPSDHNSNIN DEKQDNKGGE AEEAQSGCNG GGGGSAAPYS  180
PATVDPKRVK RILANRQSAQ RSRVRKLQYI SELERSVTSL QTEVSALSPR VAFLDHQRSL  240
LTLGNSHLKQ RIAALAQDNI FKDGGTEEGD REAEANLPAT EPEECGIPNA RRPPAGPQRQ  300
RLDSKRRDRR ACALPALVIE IRLGPEASAS GQQIKCCRCS SSCRLRRRR*
Functional Description ? help Back to Top
Source Description
UniProtTranscription regulator. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi2g06790.2.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269|PubMed:18065552}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014753813.11e-133basic leucine zipper 2
SwissprotQ5QNI51e-120BZP02_ORYSJ; Basic leucine zipper 2
TrEMBLA0A0Q3IBN40.0A0A0Q3IBN4_BRADI; Uncharacterized protein
STRINGOS01T0211800-011e-118(Oryza sativa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-66bZIP family protein
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]