PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi2g11400.7.p
Common NameBRADI_2g11400
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family G2-like
Protein Properties Length: 242aa    MW: 27488.2 Da    PI: 9.5327
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi2g11400.7.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like55.21.6e-17181232153
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53 
                       k rl+Wt+eL ++Fv++ ++L  ++ A+P +il+lm+ + Lt+e+++SHLQ +
  Bradi2g11400.7.p 181 KVRLVWTEELKKKFVNVYNKL-PPKDAVPTKILKLMNDPTLTRENIASHLQEF 232
                       67*******************.9999*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.604.4E-18178233IPR009057Homeodomain-like
SuperFamilySSF466892.87E-13179235IPR009057Homeodomain-like
TIGRFAMsTIGR015572.4E-15181232IPR006447Myb domain, plants
PfamPF002491.7E-6184230IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    Send to blast
MSSMLQPGSP CPRALVVAEY ASRRHAIETR LRLLHGFEVE AYSDPTMAMA MRRGSYQRVM  60
VDMFPLRGGA VELLECAFSE MHADAYALSK VGDSYGPLSM NNIETFKRAI KFHISTSIEA  120
TPNHRSNNSA THTVSTTLSS SRRRATSREM RRQSETKIQE AEQDGEHSEE EQQPVKKESK  180
KVRLVWTEEL KKKFVNVYNK LPPKDAVPTK ILKLMNDPTL TRENIASHLQ EFETWRSAHY  240
S*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi2g11400.7.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024315554.11e-172two-component response regulator ARR14-like
TrEMBLA0A2K2D8031e-180A0A2K2D803_BRADI; Uncharacterized protein
STRINGBRADI2G11400.11e-171(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.11e-15response regulator 14