PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bradi2g40582.1.p

Common Name

LOC100844261

Organism

Brachypodium distachyon

Taxonomic ID

15368

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium

Family

bZIP

Protein Properties

Length: 127aa MW: 13642.3 Da PI: 9.2596

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bradi2g40582.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	36.9	8e-12	27	85	5	63
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rk++NR++A+rsR+RK+ +++ Le v+++ a N a++ ++e + ++a++++e+ Bradi2g40582.1.p 27 RKRKRKESNRLSAQRSRARKQRQVDDLEAQVAAMRARNCAMAAAANEAERLCAAVQAEN 85 6789*************************************************999887 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	1.3E-9	23	87	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.0E-7	24	78	No hit	No description
PROSITE profile	PS50217	9.806	25	88	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.8E-9	26	84	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.91E-9	27	79	No hit	No description
CDD	cd14702	6.90E-9	28	60	No hit	No description
PROSITE pattern	PS00036	0	30	45	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 127 aa Download sequence Send to blast
MASPGITTSS AGSVGAATPA VALTEERKRK RKESNRLSAQ RSRARKQRQV DDLEAQVAAM 60 RARNCAMAAA ANEAERLCAA VQAENALLSA RALELSARLE SLTDLIQCMD AVMYSNNNTN 120 NNSYYY*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	26	31	RKRKRK
2	26	32	RKRKRKE

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Bradi2g40582.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_024315686.1	2e-84	bZIP transcription factor 11-like
TrEMBL	I1HNE2	4e-83	I1HNE2_BRADI; Uncharacterized protein
STRING	BRADI2G40580.1	6e-84	(Brachypodium distachyon)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13757	24	28
Representative plant	OGRP16008	3	3

Link Out ? help Back to Top
Phytozome	Bradi2g40582.1.p
Entrez Gene	100844261