PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi2g50070.1.p
Common NameBRADI_2g50070, LOC100840732
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family VOZ
Protein Properties Length: 551aa    MW: 61906 Da    PI: 5.2833
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi2g50070.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ427.71.8e-1312554721217
               VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalne.glpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 
                       p+p+afl+pkcalwdc+rpaqgse++qdycs++ha+la++e g+pgt+pv+rp+gidlkdg+lfaalsak+qgk+vgip+cegaatakspwna
  Bradi2g50070.1.p 255 PAPAAFLRPKCALWDCPRPAQGSERWQDYCSMYHAELAVKEeGPPGTMPVIRPRGIDLKDGPLFAALSAKIQGKHVGIPVCEGAATAKSPWNA 347
                       89*************************************9879************************************************** PP

               VOZ  93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyrl 185
                       +elfdl ++ege+irewlffdkprrafesgnrkqrslpdy grgwhesrkqvmk+fgglkrsyymdpqpsss+ewhlyeyein++da+alyrl
  Bradi2g50070.1.p 348 PELFDLYIFEGESIREWLFFDKPRRAFESGNRKQRSLPDYGGRGWHESRKQVMKDFGGLKRSYYMDPQPSSSYEWHLYEYEINDCDAFALYRL 440
                       ********************************************************************************************* PP

               VOZ 186 elklvdekksakgkvskdsladlqkklgrlta 217
                       e+k++d+kk+ak+k++++sl+++q++++rl+a
  Bradi2g50070.1.p 441 EFKSSDAKKNAKSKLACNSLNEIQQQMVRLSA 472
                       ******************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009408Biological Processresponse to heat
GO:0009414Biological Processresponse to water deprivation
GO:0009631Biological Processcold acclimation
GO:0009816Biological Processdefense response to bacterium, incompatible interaction
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 551 aa     Download sequence    Send to blast
MRKGSSRSGS ARHQQFRARA KTRVDDLQEM FSGLQYARKE ARSTDAVVLE AQLHQMLREW  60
RAELSAPSPA SSLQQGNDRE LSGPPSDTLR LLQLAAAEEE EDDATSKLVE QQPPSSANQA  120
HKHAQAVQDM KPEPREEVAP SLTVAQQPPS LDQEVMTTGG GMPTPATAVF HDQMYYVNQE  180
LTVEDFLYGD DYKINLPGYN PDVHSNLEGI GHLEYPQFNL PQELPSNVYI DMNNYGQNAG  240
DVFLHMSDLL ATMSPAPAAF LRPKCALWDC PRPAQGSERW QDYCSMYHAE LAVKEEGPPG  300
TMPVIRPRGI DLKDGPLFAA LSAKIQGKHV GIPVCEGAAT AKSPWNAPEL FDLYIFEGES  360
IREWLFFDKP RRAFESGNRK QRSLPDYGGR GWHESRKQVM KDFGGLKRSY YMDPQPSSSY  420
EWHLYEYEIN DCDAFALYRL EFKSSDAKKN AKSKLACNSL NEIQQQMVRL SADSPVENKR  480
AARARTKDVN MNIYSVQNNT IQGNDTNAYQ TVSQVDQMTY LNGNVVYGPH LPYGYSTERS  540
DFYWNTNDGA *
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi2g50070.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK2417650.0AK241765.1 Oryza sativa Japonica Group cDNA, clone: J065205E23, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003569827.10.0transcription factor VOZ1
SwissprotQ9SGQ01e-157VOZ1_ARATH; Transcription factor VOZ1
TrEMBLI1HRM90.0I1HRM9_BRADI; Uncharacterized protein
STRINGBRADI2G50070.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP23433888
Representative plantOGRP23271335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.21e-120vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]