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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bradi2g57940.1.p |
| Common Name | BRADI_2g57940, LOC100822835 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
GRAS |
| Protein Properties |
Length: 532aa MW: 57380.9 Da PI: 6.1385 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi2g57940.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 351.2 | 1.7e-107 | 156 | 530 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvsel....ykal.ppsetseknsseelaalklfsevs 88
lv+lL++cAeav+ +d ++a +lL +l+ a +g+++qR+a++f+++La rla + + a+ p+++s+ + + + al + +ev+
Bradi2g57940.1.p 156 LVQLLVACAEAVACRDRAQAASLLRELQAGAPVHGTAFQRVASCFVQGLADRLALAHPPAlgpaSMAFcIPQSSSSASCAGRGEALAVAYEVC 248
689**************************************************98555431111223324444444557888889999***** PP
GRAS 89 PilkfshltaNqaIleavegeervHiiDfdisqGl....QWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpf 176
P+l+f+h++aN Ilea+ege++vH++D++++ Gl QW aLl+ La+R + p+++R+Tgvg+ + ++++++g L+ +Aeelg+ +
Bradi2g57940.1.p 249 PYLRFAHFVANASILEAFEGESKVHVVDLGMTLGLdrahQWRALLDGLAARGvARPARVRVTGVGA----RVDAMRAVGLELEAYAEELGMCV 337
******************************999866666*************56666*********....9********************** PP
GRAS 177 efnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfd 269
ef++ + ++le+l++++L v+ +Ea+a+n+vl+lh +++es + +vL+++++l Pk +v+veq+a hn++ Fl rf+eal+yy+alfd
Bradi2g57940.1.p 338 EFRA-IDRTLESLHVDDLGVEADEAVAINSVLELHCVVKESRGALN---SVLQTIRKLAPKAFVLVEQDAGHNGPFFLGRFMEALHYYAALFD 426
****.799******************************88877777...8******************************************* PP
GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlg 361
+l+a lpr + r+ vE++ +g ei+nvv cega+r+erhe++ +Wr+r+++aGF+++p++ a++a+ l++ + + gy+v ee+g+lvlg
Bradi2g57940.1.p 427 ALDAALPRYDARRARVEQFHFGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSMPIKM--AAKAREWLEENAgGTGYTVAEEKGCLVLG 517
************************************************************75..4567777777777**************** PP
GRAS 362 WkdrpLvsvSaWr 374
Wk++p++++S+W+
Bradi2g57940.1.p 518 WKGKPVIAASCWK 530
************8 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 532 aa
Download sequence Send
to blast |
MGMSPSPFTT SYCLTEQDAS ICTETQELDY HHSYYYGIED VSLDEVELEL AASSGRAHKA 60
TKVDYHSSPY HISWPPPPQQ ASADVESSRV RKKQFRDVLE SCKQKVEAME AMEQHSPPLS 120
GGGVGFQDQQ GDSGHGVAVG GEGSSNSGGG TDGMRLVQLL VACAEAVACR DRAQAASLLR 180
ELQAGAPVHG TAFQRVASCF VQGLADRLAL AHPPALGPAS MAFCIPQSSS SASCAGRGEA 240
LAVAYEVCPY LRFAHFVANA SILEAFEGES KVHVVDLGMT LGLDRAHQWR ALLDGLAARG 300
VARPARVRVT GVGARVDAMR AVGLELEAYA EELGMCVEFR AIDRTLESLH VDDLGVEADE 360
AVAINSVLEL HCVVKESRGA LNSVLQTIRK LAPKAFVLVE QDAGHNGPFF LGRFMEALHY 420
YAALFDALDA ALPRYDARRA RVEQFHFGAE IRNVVGCEGA ARVERHERAD QWRRRMSRAG 480
FQSMPIKMAA KAREWLEENA GGTGYTVAEE KGCLVLGWKG KPVIAASCWK C*
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| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | HG670306 | 0.0 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
