PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g07031.2.p
Common NameBRADI_3g07031, LOC100839004
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 464aa    MW: 50225.7 Da    PI: 8.183
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g07031.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.16e-11153183434
                       XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                        k  rr+++NReAAr+sR+RKka+i++Le+ 
  Bradi3g07031.2.p 153 AKTLRRLAQNREAARKSRLRKKAYIQNLETS 183
                       6889************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.0E-4150206IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.2E-8151196No hitNo description
PROSITE profilePS502178.714152196IPR004827Basic-leucine zipper domain
PfamPF001702.3E-8153194IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.63E-7154191No hitNo description
PROSITE patternPS000360157172IPR004827Basic-leucine zipper domain
PfamPF141442.9E-26235320IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    Send to blast
MGDRPWQQPH EQLAASCSAH TGMIQASSAA AATSSIHGNI IKDPGGGYDD MAELDQALFL  60
YLNSQDQTSV QEQPQTLNIF PSRPMHVVVE PSPRAAANPP PNVAAGSSKQ QPSRPAAPAP  120
GKNGKAAVKR EGSGGGGGTP STSEQEGPRT PNAKTLRRLA QNREAARKSR LRKKAYIQNL  180
ETSRIRLSQM EQEMQRCSAQ GAILGGGAGI GGLSPEAAWF DGEHARWVEE HERMMRHLRA  240
AVELDDNNLQ HQQGHQDDGG QLRQLVDAAA AHHVVLAELK SAVARADVFH LVSGTWLPAA  300
ERCFLWIGGS RPSDLVKVVL RHVEPLTEQQ VASVCDVQRW VREREEALDQ ELQAARLSLS  360
DVVCSDALLS PYPDMAAYMA HMSLAIANLS SLEAFVRQAD TLRLQMLHRL PQILTARQAA  420
RCFLAIADYS QRLRALSSLW LARPRQGQGG QPTPPGAGGR IHP*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g07031.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3689311e-119AK368931.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2082I06.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010233971.10.0transcription factor TGAL9 isoform X2
SwissprotQ52MZ21e-138TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0Q3F6P50.0A0A0Q3F6P5_BRADI; Uncharacterized protein
STRINGPavir.J04905.1.p0.0(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.34e-85bZIP family protein