PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g25597.1.p
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family G2-like
Protein Properties Length: 253aa    MW: 27475.5 Da    PI: 12.3657
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g25597.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.83e-10184208226
           G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                       prl Wt++LH  F++ave+LGG+e+
  Bradi3g25597.1.p 184 PRLPWTSDLHMTFIHAVERLGGQER 208
                       8*********************997 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.9E-7180207IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MREEATRAHA REEQRRAAGR RRKAAGQIRK KMADVASTQR PAPAPPPRLL PAAAALLGPS  60
CRCCLLQIRQ APSSTRHRAA APRRKTAAGR ATTRRIGQRP RRREGEGGRR STAGRRARPP  120
HRRRATEERL LRPRARGEYG HAAVERPAVP PCRRRAALHH GGGCGVEDRE KPCAACGAAR  180
SKLPRLPWTS DLHMTFIHAV ERLGGQERPL CESPPPPPSS AGAAAAHRLP SPRPSSREGL  240
RTRPPLPPPS SA*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g25597.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2K2CZ881e-166A0A2K2CZ88_BRADI; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.13e-10G2-like family protein