PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g33820.1.p
Common NameBRADI_3g33820, LOC100829512
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family STAT
Protein Properties Length: 706aa    MW: 77895.2 Da    PI: 5.6352
Description STAT family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g33820.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1STAT190.42e-592313491118
              STAT   1 ldvvllnalgqpvekdvevvasLlyadsglvveks.ddaeapLLisydGvefssedrplkllrGrasfklkisqLsskcdnrLfrikfeipkl 92 
                       l+vvl+na+g+p++kd+++vasL+yad+g+vveks ddaeapLLis++G+e++++++pl++lrGra+fklkisqLsskcdn+Lfri+f+++++
  Bradi3g33820.1.p 231 LEVVLTNAFGEPANKDIQIVASLVYADTGVVVEKSrDDAEAPLLISCEGLEYPATSKPLPILRGRALFKLKISQLSSKCDNKLFRIYFSTLHV 323
                       79*********************************9********************************************************* PP

              STAT  93 kkypfleavskpirCisrsrntrsss 118
                       +kypflea s+pirCisr r  r+++
  Bradi3g33820.1.p 324 QKYPFLEASSRPIRCISRGRPIRPLG 349
                       *********************99875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.505.103.2E-4601673IPR000980SH2 domain
SuperFamilySSF555502.35E-8603685IPR000980SH2 domain
PROSITE profilePS5000110.582607705IPR000980SH2 domain
Sequence ? help Back to Top
Protein Sequence    Length: 706 aa     Download sequence    Send to blast
MAAPAESGGI EDYRSLRDAR VDLDLEAARG SGEGGRARGF AVCFWLYLSG PARPSSVLLH  60
QMTAGADNKL PFLVLSEQNK LLLFPLLRLH REAPSLSSFY PWTDTTNLSS VNECPLEKWI  120
HIGCEVTENV MRLHIDGSLV AEACLCSLSR EPDNQDDAHQ ICLVGSNNMV ESYLNNIQVL  180
SVLGTIHEQY TKNPPSKLSI DFSCYDGIEV GDDGVWCIVG GKPSCRRNVI LEVVLTNAFG  240
EPANKDIQIV ASLVYADTGV VVEKSRDDAE APLLISCEGL EYPATSKPLP ILRGRALFKL  300
KISQLSSKCD NKLFRIYFST LHVQKYPFLE ASSRPIRCIS RGRPIRPLGP GKGTNSSTMD  360
EIHLVNNAQG FGRVGKVIGC SQSRDQSSVV HLHPSKFLKV EDDGTETHKT VSQTRKMVVE  420
AQSVTRTDPA ASDSDSMDAR SSWSGSDRDE VETFSDAIIF RYCLEGTSQR STFLRGAAAS  480
INVDDLITLA NQVSLYSGCS HHRNQIIISK QLLEEAADTW SIISKNNERA LWSSAVPEIM  540
AKFMVIAHST NRGLSEQDQE VLRVIAGCGD DLGRDEFDRL WNWLYPVAVS LSKDKINNLW  600
CCTEPVWIEG LITKEEAENA LRSSSELLKN PGTFVLRFPT TRSWPHPDAG SLVVTYVGFD  660
NSIHHRLLSL DASDSRAGSL QDLLLQEPEL LQLGRVDRLP TAMRN*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g33820.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_014755564.10.0SH2 domain-containing protein A isoform X2
TrEMBLI1I6B10.0I1I6B1_BRADI; Uncharacterized protein
STRINGBRADI3G33820.10.0(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78540.11e-147SH2 domain protein B