PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g37930.2.p
Common NameBRADI_3g37930, LOC100829119
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family GeBP
Protein Properties Length: 433aa    MW: 47140.4 Da    PI: 10.2597
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g37930.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57394.51.1e-29178275297
            DUF573   2 lfqrlwseeDeivlLqGlidfkaktgk..spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifels 92 
                       ++ r+ws +Dei++L+ li+++ak+g+   + +++ ++++++++++++++s++ql++KirrLK+Kf+  v++ak+g+ep++ ++hd++ +el 
  Bradi3g37930.2.p 178 RPPRVWSPQDEITILRSLISYRAKKGVlpASNQETGKLHDQIRGKLNAEASTTQLTDKIRRLKHKFRLLVDRAKEGREPELPTTHDRDLYELG 270
                       578************************777778************************************************************ PP

            DUF573  93 kkiWg 97 
                       kk+Wg
  Bradi3g37930.2.p 271 KKVWG 275
                       ****8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045048.8E-28180275IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    Send to blast
MAPKRPAASS PAASGSASDG EADPPHHDHH SPSPSPSPSP SPSPSRSRSK TPPPNLHPAA  60
AALSSTPISA AIERAAASAS ASESEGRLPS PRRSHERSPR LHSDSDNSAA ASDEDNHTPP  120
RRSAPRSSLI DPSDVRPISS RPMDSAARRA SQRRSKRPRN TLLALPRSSV LSLDRHKRPP  180
RVWSPQDEIT ILRSLISYRA KKGVLPASNQ ETGKLHDQIR GKLNAEASTT QLTDKIRRLK  240
HKFRLLVDRA KEGREPELPT THDRDLYELG KKVWGVKTGG AGSGGGGAYE NNEVAESDEE  300
QRSGESDEDM EGDWDDQDRS NNRRPKAVPV SNGIVNAIAI GGRTRHGNSS GKGVVAKGKD  360
MYPYLWEAVD ELSKEHPSGT VFRKAFDVLE GPRALAMEEK LEKFKHSEIR QQLRRMDLMK  420
ETVKMVLDAL EG*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g37930.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003574606.10.0STOREKEEPER protein
TrEMBLI1I7R30.0I1I7R3_BRADI; Uncharacterized protein
STRINGBRADI3G37930.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP26713587
Representative plantOGRP1071349
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04930.21e-14DNA-binding storekeeper protein-related transcriptional regulator