PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g57640.1.p
Common NameBRADI_3g57640
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family GeBP
Protein Properties Length: 322aa    MW: 35476 Da    PI: 4.3562
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g57640.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57343.68.1e-14143231498
            DUF573   4 qrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkv.sksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95 
                        r+ws +De+ +L +l+  ++++g+ p+   da++e + ++++ ++  +++l +K   L++++++  k+   g+  + +kehd++ ++ls++i
  Bradi3g57640.1.p 143 PRVWSTDDEVHILEALVAHRQEHGVLPQP--DALMEALAGKLDNRAyGSKELQSKQATLRQRYNNAIKR---GE--VPTKEHDRQLYDLSNII 228
                       69**********************77766..5899*****99987516889*****************9...54..5689************* PP

            DUF573  96 Wgs 98 
                       Wgs
  Bradi3g57640.1.p 229 WGS 231
                       *95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045044.4E-19143230IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MAPKRGAKSQ APPPPPAASS SSETDSRSRS EESEDEETAL ASPPPPTRNP PAPPQKGEES  60
ETTDDEDEEE EEEEDDEEEE PARAAPVTAP PVPQQQGEES DEEGESSESD EEAPPPEQAA  120
KMEAEKLKPP PSSGEAKKPG GIPRVWSTDD EVHILEALVA HRQEHGVLPQ PDALMEALAG  180
KLDNRAYGSK ELQSKQATLR QRYNNAIKRG EVPTKEHDRQ LYDLSNIIWG SGKTAAAKAN  240
GDEPRSFAEM CELYPYLAEE VKELEAGHPG LFKREFGKMD DDKARAMDTK IKRQRLVQMK  300
VEMRRGDLAK EVRKTLIELL D*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289294KIKRQR
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g57640.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024311955.11e-162uncharacterized protein LOC100829980 isoform X2
RefseqXP_024311956.11e-162uncharacterized protein LOC100829980 isoform X2
TrEMBLI1IER00.0I1IER0_BRADI; Uncharacterized protein
STRINGBRADI3G57640.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP67292737
Representative plantOGRP1106545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.15e-09DNA-binding storekeeper protein-related transcriptional regulator