PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi3g60870.1.p
Common NameBRADI_3g60870, LOC100837389
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 147aa    MW: 16020 Da    PI: 10.4627
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi3g60870.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_147.15e-1565124160
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                       e++ +r  r++kNRe+A rsR+RK+a+++eLe++v  L   N +Lk + ++lk e+a+l 
  Bradi3g60870.1.p  65 EEDEQRSVRMMKNRESALRSRARKRAYVQELEKEVSRLVDHNLKLKRQCKQLKTEMAALV 124
                       677899************************************************999885 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1702.1E-1560125No hitNo description
PRINTSPR000415.6E-56480IPR001630cAMP response element binding (CREB) protein
SMARTSM003383.5E-1265129IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.38167123IPR004827Basic-leucine zipper domain
PfamPF001704.3E-1268124IPR004827Basic-leucine zipper domain
CDDcd147075.76E-1769123No hitNo description
SuperFamilySSF579591.25E-1170125No hitNo description
PRINTSPR000415.6E-582102IPR001630cAMP response element binding (CREB) protein
PRINTSPR000415.6E-5102119IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MSREEAGGSP GQLSLSSFSS LFSVSSATST PTPHLPPLPS LSLSIGGGGN DEQPPLSSSS  60
AVNQEEDEQR SVRMMKNRES ALRSRARKRA YVQELEKEVS RLVDHNLKLK RQCKQLKTEM  120
AALVQAQQQP SKSPQYRRTP SSSTHL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi3g60870.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU3071153e-35EU307115.1 Triticum aestivum FD-like 13 protein mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003570743.11e-101ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1IFV02e-99I1IFV0_BRADI; Uncharacterized protein
STRINGBRADI3G60870.11e-100(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP40173072
Representative plantOGRP9528513
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.11e-13bZIP family protein