PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g13570.1.p
Common NameBRADI_4g13570
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 76aa    MW: 8005.36 Da    PI: 6.5139
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g13570.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM362e-111362151
               NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkv 51
                      lp Gf F P deel v+yL+kk+ +  l+  ++i+ +d+ +++P dLp + 
  Bradi4g13570.1.p 13 LPIGFPFLPADEELAVHYLRKKALSFLLSS-DIIHVADLARIDPADLPGES 62
                      699**********************99999.99**************9432 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019417.19E-15971IPR003441NAC domain
PROSITE profilePS5100517.2021375IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 76 aa     Download sequence    Send to blast
MATPVSGGGV LGLPIGFPFL PADEELAVHY LRKKALSFLL SSDIIHVADL ARIDPADLPG  60
ESRKFLPVRG AAVYF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g13570.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003561060.16e-19NAC domain-containing protein 83
TrEMBLI1IKC04e-45I1IKC0_BRADI; Uncharacterized protein
STRINGBRADI4G13570.17e-46(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2278446
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13180.18e-14NAC domain containing protein 83