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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bradi4g24867.1.p |
| Common Name | BRADI_4g24867 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
GRAS |
| Protein Properties |
Length: 469aa MW: 51674.5 Da PI: 4.7594 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi4g24867.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 207.8 | 6.2e-64 | 103 | 465 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.....aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsP 89
++lLl+ Aeav++gd +la+a+ +rl l + + ++ Rla +f+++L++rl++ +pp e s++++++++ +e+sP
Bradi4g24867.1.p 103 TDLLLTGAEAVEAGDSRLATAVFSRLDGLllgipENAAVGSFDRLAYHFAQGLRSRLSS----ANTRCPPPEP---LPSDRMSVQQIIQELSP 188
689***********************99888764445558******************9....2222333333...369999*********** PP
GRAS 90 ilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlv 182
+ kf+h+taNqaIl+a++g++ vH++D++i++G+QWp+L+ Las g s+ +T++ + s + ++ ++rL++fA++l++pf++n l
Bradi4g24867.1.p 189 FAKFAHFTANQAILDATKGDSDVHVVDLNIGEGVQWPSLMSDLASH--GGRSFHLTAIITDADYSYDVHQASARRLSEFADSLKLPFQYNSLR 279
********************************************95..7789********8888***************************84 PP
GRAS 183 akrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe.adhnse......sFlerflealeyysalf 268
+d +l++++ + + ++ ++ ++ l + r+ + +vk l+Pk++v+ve+e + ++e sF++ f+eal++++++
Bradi4g24867.1.p 280 I--HSDEDLHDFSKSCNGPVIFSCDTTSMTYK----LLGKLRTILPGCVKMLRPKLMVIVEEElVGIGKEasvcntSFVDFFFEALHHFTTVS 366
4..45556789988889999999998777765....34444445558***************96333444556666***************** PP
GRAS 269 dsleaklpres..eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslv 359
+sl++ ++ + + vEr ++g++i++ v + g e + le+ G + ++s ++++qa++l+ ++ +g+ v +e+g lv
Bradi4g24867.1.p 367 ESLASCFSGGNhgLCLRLVERDMVGPRIQDFVEHYGPVTLEPNA-----PGVLERYG--ACEMSASNVAQARMLVGLFN-RGFGVVHEKGRLV 451
***99988888788999********************9444444.....67888877..678888999***********.************* PP
GRAS 360 lgWkdrpLvsvSaW 373
l+Wk+r+L+svS+W
Bradi4g24867.1.p 452 LCWKSRALTSVSVW 465
************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 469 aa
Download sequence Send
to blast |
METMSYPCSP LLSFPTHEEN NFVLWSPQVA LHEDATIHVD PSTHQLHDCG FLDTMALDYS 60
NDWHRQDASD VGMFIDCDER ILGQENGDLM AIQEELMEEN SLTDLLLTGA EAVEAGDSRL 120
ATAVFSRLDG LLLGIPENAA VGSFDRLAYH FAQGLRSRLS SANTRCPPPE PLPSDRMSVQ 180
QIIQELSPFA KFAHFTANQA ILDATKGDSD VHVVDLNIGE GVQWPSLMSD LASHGGRSFH 240
LTAIITDADY SYDVHQASAR RLSEFADSLK LPFQYNSLRI HSDEDLHDFS KSCNGPVIFS 300
CDTTSMTYKL LGKLRTILPG CVKMLRPKLM VIVEEELVGI GKEASVCNTS FVDFFFEALH 360
HFTTVSESLA SCFSGGNHGL CLRLVERDMV GPRIQDFVEH YGPVTLEPNA PGVLERYGAC 420
EMSASNVAQA RMLVGLFNRG FGVVHEKGRL VLCWKSRALT SVSVWAPI*
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