PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g33740.2.p
Common NameBRADI_4g33740
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 470aa    MW: 51708 Da    PI: 6.7568
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g33740.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.62.1e-11210242133
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 
                       e++ k  rr+++NReAAr+sR+RKka+i++Le 
  Bradi4g33740.2.p 210 ERDPKTLRRLAQNREAARKSRLRKKAYIQQLES 242
                       6777999************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.1E-7208255No hitNo description
SMARTSM003381.9E-6210299IPR004827Basic-leucine zipper domain
PfamPF001703.4E-8211242IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.002212254IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.0E-7214254No hitNo description
PROSITE patternPS000360217232IPR004827Basic-leucine zipper domain
PfamPF141446.6E-28308381IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    Send to blast
MMSAAGSQSQ QQEIIRQHQQ QQQEMEMNIS FGMSSQHHSL HHHAPPSSSS SSSMHAAAAA  60
SFMSAKEAAA ASGAYDQLGD LDQALFMYLD HGHGSQHASA HHQEQRQTLN IFPSQPMHVE  120
PSPKGEISLA VLSPAPVGSK MPRSSPDHHQ HQHQLQQAAM EELAGSRRQQ EHHLAVQQQH  180
QQPFAAEPAG VSKDVKPLAK KDKRGLSTSE RDPKTLRRLA QNREAARKSR LRKKAYIQQL  240
ESSRIRLAQI EQELHSARAQ GVFFPGSGLL TEQGVTGKGL GGIDGLSSEA AMFDVEYGRW  300
QEEHYRVMYE LRAALQQQLP EGELQMYVEN CLAHHDEVVA IKDAVIKGDV FHLTSGVWRS  360
PAERCFLWLG GFRPSEVIKM VLGHVEPLAE QQIVAVYGLQ QSAAETEEAL SQGLDALYQS  420
LSDTVVSDAL SCPPANVANY MGQMHVAMNK LSTLEGFVRQ TVLHYTANG*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00491DAPTransfer from AT5G06839Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g33740.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3666600.0AK366660.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, partial cds, clone: NIASHv2045H07.
GenBankAK3756510.0AK375651.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3100G14.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010238296.10.0transcription factor TGA2.2 isoform X1
SwissprotQ52MZ21e-137TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0Q3IXF30.0A0A0Q3IXF3_BRADI; Uncharacterized protein
STRINGBRADI4G33740.10.0(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-115bZIP family protein