PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g33750.1.p
Common NameBRADI_4g33750, LOC100824026
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family EIL
Protein Properties Length: 609aa    MW: 67407.6 Da    PI: 5.8191
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g33750.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3424.21.3e-129354121349
                       XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
              EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLra 93 
                       eel +rmwkd+++l+r+ker+++l   ++a+++++k + +++qa rkkm+ra DgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++ra
  Bradi4g33750.1.p  35 EELARRMWKDRVRLRRIKERQQKLA-LQQAELEKSKPKPISDQAMRKKMARAHDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNIRA 126
                       8********************9865.66777************************************************************** PP

                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT- CS
              EIN3  94 WWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelgl 186
                       WWkekv+fd+ngpaai+ky+a+nl++++++s    + ++ hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++pPWWP+G+e+ww +lgl
  Bradi4g33750.1.p 127 WWKEKVKFDKNGPAAIAKYDAENLVAADAQST---AVKNDHSLMDLQDATLGSLLSSLMQHCSPPQRKYPLEKGTPPPWWPSGDEEWWIALGL 216
                       *************************9987777...78******************************************************** PP

                       -TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX......XX..XXXXXX CS
              EIN3 187 skdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah......ss..slrkqs 271
                       +  q   pykkphdlkk+wkv+vLt+vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee++++++  +      ss  +  ++ 
  Bradi4g33750.1.p 217 PSGQI-APYKKPHDLKKVWKVGVLTCVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVHSIGNSvlaitySSapE-YRNV 307
                       **999.8****************************************************************99988865443311433.3366 PP

                       XXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX..............................XXXXXXXXXXXXXXXXXXXXX......XXXXX CS
              EIN3 272 pkvtlsceqkedvegkkeskikhvqavktta..............................gfpvvrkrkkkpsesakvsskevsrtcqssqf 334
                       +  t s+++++dv+g +e   ++++++++++                              +   +  +++++ ++a  ss+ +    q+   
  Bradi4g33750.1.p 308 NGNTNSSSNEYDVDGFEEAPLSASSKDDEQDlppaaqsseehvslrgrerantkhpnqavlK---AGAKEQPNIKRARHSSTAIEHGVQRTDD 397
                       667778888*****999999999999999889999999888888888887777777664331...2233334444444444444444444444 PP

                       XX.XXXXXXXXXXXX CS
              EIN3 335 rgsetelifadknsi 349
                         +++++ ++d+n++
  Bradi4g33750.1.p 398 APENSRNLIPDMNRL 412
                       445666666666665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.2E-12435283No hitNo description
Gene3DG3DSA:1.10.3180.103.0E-68157289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167689.94E-59164286IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MDQLAMLATE FGDSSDFEVD GITENDVSDE EIEPEELARR MWKDRVRLRR IKERQQKLAL  60
QQAELEKSKP KPISDQAMRK KMARAHDGIL KYMLKLMEVC NARGFVYGII PDKGKPVSGA  120
SDNIRAWWKE KVKFDKNGPA AIAKYDAENL VAADAQSTAV KNDHSLMDLQ DATLGSLLSS  180
LMQHCSPPQR KYPLEKGTPP PWWPSGDEEW WIALGLPSGQ IAPYKKPHDL KKVWKVGVLT  240
CVIKHMSPNF DKIRNHVRKS KCLQDKMTAK ESLIWLGVLQ REERLVHSIG NSVLAITYSS  300
APEYRNVNGN TNSSSNEYDV DGFEEAPLSA SSKDDEQDLP PAAQSSEEHV SLRGRERANT  360
KHPNQAVLKA GAKEQPNIKR ARHSSTAIEH GVQRTDDAPE NSRNLIPDMN RLDHVEIPGM  420
SNQIISFTQV GVTSESLQHR GDQGHVYLPG GGANSFDNAE AANATPVSIY MGGQPVPYES  480
SDNARSKSGN PFPLADDSGF NNLPSSYKTP LKQSLPLSRM DHHVVPAGIR APAVNSPYGD  540
HVIDGGNSTS VPGDMQHLID FPFYPEQDKF VGSSFEGLPL DYISISSPIP DIDDFLLHDD  600
DLMEYLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A4e-6416629212138ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g33750.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024318458.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_024318459.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-141EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLI1IR950.0I1IR95_BRADI; Uncharacterized protein
STRINGBRADI4G33750.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Representative plantOGRP5631682
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-138ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]