PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g35370.1.p
Common NameBRADI_4g35370, LOC100827309
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 468aa    MW: 49854.8 Da    PI: 10.4577
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g35370.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.86.1e-10317363551
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 
                       kr +r   NR++A +s +RK  ++ eLe+kv++L++e  +L  ++ +
  Bradi4g35370.1.p 317 KRVKRILNNRVSAAKSKERKVRYMSELERKVQVLQKETATLTGQVAM 363
                       899***********************************999876655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.2E-12313377IPR004827Basic-leucine zipper domain
PfamPF077166.6E-9314366IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.9E-9315371No hitNo description
PROSITE profilePS5021710.473315378IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.5E-11317371No hitNo description
CDDcd147033.10E-20318368No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 468 aa     Download sequence    Send to blast
MDDDPVRRRR LLALPGPRAP ADSYGNRVPP SFLLPPVHPA PVRFGQGAFG YYQAPPLPPA  60
SAGGGGAGSS HHARSLSQPQ LSSMDFLFGP NSYANPAAPT PIAFAPPQPP PANSPSGLPP  120
LRAGHRRSQS DFQLGFSQPN PQMPPPAPVN PQTPAPEGRE SVTANKNKTL ADGPLGSRKS  180
PKGLDNVAGS SADGAQERRD QVDSQARGPR AWSPADSSDN ETESADGSVP RHGRSLSADS  240
FVGKLTFGSV GLVSSNLPPS SPGKEAPGKL ARSGSGSIGG AAALVATDIA IGGFSEADKK  300
KIMENERLAE IVLTDPKRVK RILNNRVSAA KSKERKVRYM SELERKVQVL QKETATLTGQ  360
VAMIQRDHSV LSTHNNELKI RLRAMEQQAQ LRDALSETLN SEVQRLKLAA GEISDPHVLN  420
GSQQQMSSQM IQLQQLQILK QSSETQQAQQ QPQHSVQPGT QQQQWNV*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g35370.1.p
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003576738.10.0transcription factor RF2a
TrEMBLI1IRX00.0I1IRX0_BRADI; Uncharacterized protein
STRINGBRADI4G35370.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP148701820
Representative plantOGRP12617181
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38900.33e-50bZIP family protein