PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g36587.1.p
Common NameBRADI_4g36587, LOC100836290
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 189aa    MW: 19696.4 Da    PI: 10.1607
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g36587.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_155.31.5e-17119171557
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                       +r +r++kNRe+A+rsR+RK+a + +Le +v eL+ eN++L+ + ++lk  v+
  Bradi4g36587.1.p 119 RRKKRMIKNRESASRSRARKQAHVTQLESEVRELQLENDELRIKYDQLKASVE 171
                       699**********************************************9876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-13115182IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.438117171IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.0E-15119171No hitNo description
SuperFamilySSF579592.56E-13119170No hitNo description
PfamPF001704.3E-14119171IPR004827Basic-leucine zipper domain
CDDcd147071.31E-21119173No hitNo description
PROSITE patternPS000360122137IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 189 aa     Download sequence    Send to blast
MAMAAMEDDE DMWAVTTSPS ASPPATAAAA AISTALSLNP RLHLLASSSS PFHPGFGGCS  60
RNAAAASPPC FFSAAAASSF PHFAAAPLDG AARGMCGLAP VPAWSGAAPT GTGAGPVERR  120
KKRMIKNRES ASRSRARKQA HVTQLESEVR ELQLENDELR IKYDQLKASV EAPVPVKRTL  180
KRVLSAPF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g36587.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578537.21e-133bZIP transcription factor TRAB1 isoform X1
TrEMBLA0A0Q3LF281e-132A0A0Q3LF28_BRADI; Uncharacterized protein
STRINGBRADI4G36587.11e-131(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP97643044
Representative plantOGRP1475044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17770.28e-19basic region/leucine zipper motif 27