PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g42126.2.p
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 311aa    MW: 32111.5 Da    PI: 5.0133
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g42126.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_126.41.5e-0894156163
                       XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                       eke kr rr   NRe+Ar   +R++a  +eL++kv+ L ++N+++kke e   +e+ +l+  +
  Bradi4g42126.2.p  94 EKEAKRLRRVLANRESARQTILRRQAIRDELARKVADLASQNESMKKEKEAVMQEYLALQETN 156
                       89******************************************************9998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.3E-491156No hitNo description
SMARTSM003382.0E-1094158IPR004827Basic-leucine zipper domain
PfamPF001707.1E-894156IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.87596159IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.18E-698153No hitNo description
CDDcd147025.29E-1399149No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    Send to blast
MALADMAGAV AAAPPPPQAE RSSGAHGDGD YGEEEEASTR LSLELGKVGV QGAAAASSAC  60
SSAGQQHKQV LPAVAAPGAG YGARPRNSAL TEAEKEAKRL RRVLANRESA RQTILRRQAI  120
RDELARKVAD LASQNESMKK EKEAVMQEYL ALQETNKQLR EQAVAKAAAA AMDIDTAEEP  180
ARRAEGNAAS SPAPAAPPPH PGFLCATAGP PAMPVPHVWG SWPPGYDPRV GNPAALAPPP  240
SYAHQSLFPS GGGSPGGTGA GEEDTEDEDD DDPCSLTLGL DVSGSREDKA AEARRKELTK  300
TRQPHTPGGD *
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g42126.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9585024e-64EU958502.1 Zea mays clone 1697405 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024310433.11e-107bZIP transcription factor 68-like
TrEMBLA0A2K2CTS20.0A0A2K2CTS2_BRADI; Uncharacterized protein
STRINGBRADI4G42120.13e-76(Brachypodium distachyon)
STRINGTraes_5BL_6C613A3D9.18e-76(Triticum aestivum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP31653475
Representative plantOGRP45691318
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19490.14e-15bZIP family protein