PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast01G282100.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family G2-like
Protein Properties Length: 249aa    MW: 27940.8 Da    PI: 9.0562
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast01G282100.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like54.13.5e-17200249151
             G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 
                         k+rl+Wt+eLH++Fv+a ++L  ++  +Pk+il+lm+ + L++e+++SHLQ
  Brast01G282100.1.p 200 KARLVWTEELHNSFVNAYNKL-LPKDRVPKKILKLMNDPRLSRENIASHLQ 249
                         68*******************.88889***********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF521727.8E-52592IPR011006CheY-like superfamily
Gene3DG3DSA:1.10.10.601.1E-18197249IPR009057Homeodomain-like
SuperFamilySSF466891.24E-11198249IPR009057Homeodomain-like
TIGRFAMsTIGR015576.5E-16200249IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    Send to blast
MDHVPPAAPG AGGHIPLPLL MHPCPRALVV SGDASRLQAM ETGLRQEGYK EVETYPDPTM  60
AMAMRRGRYE LVMVDMFPLR ADAFDLLECA ISEMNAEAHA LSKVGDKYEK LSIQDLETIR  120
KTIKFNKSTS PEGTPNHDNN SPTSTVSTTT TTTTTTGSSS GRRVPGRKMI QQHGMKSQEV  180
EQDREHTEDQ RQQLTHKSKK ARLVWTEELH NSFVNAYNKL LPKDRVPKKI LKLMNDPRLS  240
RENIASHLQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast01G282100.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010233072.31e-143two-component response regulator ARR14
TrEMBLA0A2K2D8431e-143A0A2K2D843_BRADI; Uncharacterized protein
STRINGBRADI2G11400.11e-84(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2089145
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01760.15e-16response regulator 14