PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast01G364800.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family BES1
Protein Properties Length: 172aa    MW: 18485.8 Da    PI: 10.1861
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast01G364800.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822126.92.4e-39451552111
              DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyr.kgskpleeaeaagssasaspe 91 
                         +s r+pt +ErEnn++RERrRR++a++iyaGLRa ++y+lpk+aD+n+Vl+ALc+eAG++v+++G++ r    ++ +  +    s++  p 
  Brast01G364800.1.p  45 TSLRHPTPRERENNRQRERRRRQVATRIYAGLRARAGYALPKHADQNDVLRALCAEAGYLVDEEGNVSRlLPAERSSGGAGPSGSSDHLPP 135
                         689******************************************************************4233344566666777777788 PP

              DUF822  92 sslqsslkssalaspvesys 111
                         ss + ++++ a + p ++ +
  Brast01G364800.1.p 136 SSCSGATEAVAPQQPEPEPE 155
                         88774444444444443333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056874.5E-2947132IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MAPMEAAAEA GEVAAMAAAG RRGCIRATRG PWTVRRQARG GAVKTSLRHP TPRERENNRQ  60
RERRRRQVAT RIYAGLRARA GYALPKHADQ NDVLRALCAE AGYLVDEEGN VSRLLPAERS  120
SGGAGPSGSS DHLPPSSCSG ATEAVAPQQP EPEPEQKHKM SLELTLSFTY M*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A4e-1312113336437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B4e-1312113336437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C4e-1312113336437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D4e-1312113336437Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast01G364800.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703061e-108HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010232995.11e-73BES1/BZR1 homolog protein 2
TrEMBLA0A0Q3MEY93e-72A0A0Q3MEY9_BRADI; Uncharacterized protein
STRINGLPERR01G04680.12e-54(Leersia perrieri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132013032
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19350.38e-15BES1 family protein