PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast02G155300.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 183aa    MW: 20973 Da    PI: 10.1452
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast02G155300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.47.3e-091979363
                        XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
                        e +r  r+ +NR++ArrsR +++++ e L+  +  L+ eN+a++ +    ++++  l++e+
  Brast02G155300.1.p 19 EERRRNRMTSNRLSARRSRMKRQQREEDLAAQASRLKLENEAMRATFGIRQQQCRLLQQEN 79
                        567889***************************************9999999999888877 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.7E-101781IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1705.5E-91777No hitNo description
PfamPF077161.8E-51878IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.8641982IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.03E-82176No hitNo description
CDDcd147028.63E-132265No hitNo description
PROSITE patternPS0003602539IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 183 aa     Download sequence    Send to blast
MVPRQRPAGA PRRRAITEEE RRRNRMTSNR LSARRSRMKR QQREEDLAAQ ASRLKLENEA  60
MRATFGIRQQ QCRLLQQENR VRAAHARELY VVLQLRNSQL RMLGHVAEVP LDVPEVSAHL  120
TQLYGGGPPP VVPPQPPEIY QMLFQPTLEP GIDQMLFQPP LEPGIDQRLF QPPDDVMDDE  180
AS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13439RSRMKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast02G155300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010228714.14e-88bZIP transcription factor 53
TrEMBLI1H6899e-87I1H689_BRADI; Uncharacterized protein
STRINGBRADI1G64550.11e-87(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP125042837
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G62420.18e-09basic region/leucine zipper motif 53