PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast02G251300.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family G2-like
Protein Properties Length: 136aa    MW: 14944.7 Da    PI: 4.0784
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast02G251300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.62.7e-081203655
             G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                        m+v gLt  ++kSHLQkYR 
  Brast02G251300.1.p  1 MGVTGLTTWNIKSHLQKYRE 20
                        99*****************5 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.9E-6119IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MGVTGLTTWN IKSHLQKYRE GCGLGAKPPL DVLDTASPSE AAHDRTSETE VAMNNNEAMT  60
EMEMVNNLLM GDMEMAETDF SAEKVQMVEN ELMNEIQLIK HGSQYSQIPI DEYVYDLGKY  120
PFDKDSSGLA SSSSL*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast02G251300.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010231922.18e-78protein PHR1-LIKE 2-like isoform X1
RefseqXP_010231927.18e-78protein PHR1-LIKE 2-like isoform X1
RefseqXP_024310546.13e-78protein PHR1-LIKE 2-like isoform X2
TrEMBLI1GPW88e-77I1GPW8_BRADI; Uncharacterized protein
STRINGBRADI1G13422.11e-77(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP154991216