PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast02G260600.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 149aa    MW: 15980.2 Da    PI: 12.2687
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast02G260600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.42.1e-104690549
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49
                        +r +rk++NRe+ArrsR+RK+  ++ L+  ++ L   N++L  ++
  Brast02G260600.1.p 46 RRLKRKISNRESARRSRARKQRHLDGLRALAARLRHGNRELSARA 90
                        689*************************************99876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-842106IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.00244107IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.8E-64492No hitNo description
PfamPF001704.4E-74691IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.69E-84695No hitNo description
PROSITE patternPS0003604964IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 149 aa     Download sequence    Send to blast
MTTSAGSNAF QSFTPQSDNG FGTNAELAAH PLLPIEAASD GVVKERRLKR KISNRESARR  60
SRARKQRHLD GLRALAARLR HGNRELSARA RAARGRVALV RLANAELRAE AGALSRRLEA  120
AARQALALGQ LYAAAHGAFE QTMASLMV*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15865RRSRARKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast02G260600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003559588.18e-66bZIP transcription factor 2
TrEMBLI1GPM52e-64I1GPM5_BRADI; Uncharacterized protein
STRINGBRADI1G12620.13e-65(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2274346