PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast02G321400.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 162aa    MW: 18221.7 Da    PI: 11.7865
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast02G321400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.27.2e-1357105250
                         XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         + ++r+rrk++NR++ArrsR+RK+++++eL+ +++ L a++k+L  +l 
  Brast02G321400.1.p  57 ALRRRQRRKMSNRLSARRSRARKQQRLDELRAEAARLRAQRKELGARLH 105
                         6689**************************************9987775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.5E-751106No hitNo description
SMARTSM003381.6E-755120IPR004827Basic-leucine zipper domain
PfamPF001708.3E-857105IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.12858109IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.08E-760109No hitNo description
PROSITE patternPS0003606378IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    Send to blast
MLSLQEAIDF DHLDAMTSGF GGFTPWGPDT CPTLEQLMAS SSSSAAAAEE EQDDEEALRR  60
RQRRKMSNRL SARRSRARKQ QRLDELRAEA ARLRAQRKEL GARLHAVARH GLTARGQSAR  120
LRAEAAALAR RLRDARRLLA LQRLTRQLLE ITCSQVKFWN G*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17279RRSRARKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast02G321400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003559385.22e-50ocs element-binding factor 1
TrEMBLI1GMV25e-49I1GMV2_BRADI; Uncharacterized protein
STRINGBRADI1G07310.18e-50(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP138452429