PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast03G274200.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family EIL
Protein Properties Length: 607aa    MW: 67571 Da    PI: 5.834
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast03G274200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3402.55.5e-123383651303
                         XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 
                         +el +rmwkd+++ kr+ker+++l   ++a+++++ks+++++ a rkkm+ra DgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++
  Brast03G274200.1.p  38 DELARRMWKDKVRFKRIKERQQKLA-LQQAELENAKSKNISDLALRKKMARAHDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNI 127
                         79*******************9865.66667************************************************************ PP

                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS
                EIN3  92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182
                         raWWkekv+fd+ngpaai+ky+ +n +l +  s+   ++ +  sl++lqD+tlgSLLsalmqhc+p+qr++pl+kg++pPWWP+G+e+ww 
  Brast03G274200.1.p 128 RAWWKEKVKFDKNGPAAIAKYEVENSVLFNTMSS---GTTNDYSLMDLQDATLGSLLSALMQHCSPQQRKYPLDKGIPPPWWPSGNEEWWI 215
                         *****************************88888...8899************************************************** PP

                         HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX.XX...XXXX CS
                EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah.ss...slrk 269
                         +lgl+     ppykkphdlkk+wkv+vLt vikhm+p++++ir+ +r+sk+lqdkm+akes ++lsvl++ee  ++++ +  s+       
  Brast03G274200.1.p 216 ALGLPMGKT-PPYKKPHDLKKVWKVGVLTGVIKHMAPNFDKIRNYVRKSKCLQDKMTAKESLIWLSVLQKEETRIHSIDSGvSEithR--Y 303
                         *****8877.*****************************************************************9999995445431..2 PP

                         ...XXXXXXXXXXXXXXXX.XXXXXX.XXXXXXXXXX.........................X CS
                EIN3 270 ...qspkvtlsceqkedve.gkkeskikhvqavktta.........................g 303
                            +++   +s+++++dv+  +k ++ ++ + ++  a                         +
  Brast03G274200.1.p 304 elgDKNGNSYSSSDEYDVDcLDKPPH-SATSRDSVGAhqlavqirednvssrgdrkhhdkqsT 365
                         455677788899999****6444444.444444443333444444343333333333333330 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048734.3E-12338286No hitNo description
Gene3DG3DSA:1.10.3180.101.7E-67162292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.79E-60167289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 607 aa     Download sequence    Send to blast
MDHLAIVPSE LGDVSDFEVD GIQNLTENDV SDEEIEADEL ARRMWKDKVR FKRIKERQQK  60
LALQQAELEN AKSKNISDLA LRKKMARAHD GILKYMLKLM EVCNARGFVY GIIPDKGKPV  120
SGASDNIRAW WKEKVKFDKN GPAAIAKYEV ENSVLFNTMS SGTTNDYSLM DLQDATLGSL  180
LSALMQHCSP QQRKYPLDKG IPPPWWPSGN EEWWIALGLP MGKTPPYKKP HDLKKVWKVG  240
VLTGVIKHMA PNFDKIRNYV RKSKCLQDKM TAKESLIWLS VLQKEETRIH SIDSGVSEIT  300
HRYELGDKNG NSYSSSDEYD VDCLDKPPHS ATSRDSVGAH QLAVQIREDN VSSRGDRKHH  360
DKQSTGALPS DKKTKESRKR KRRTGQFPVD ESVIEVIQRN DDLPPDMNKN QMEVPPMANR  420
LTSVNNVSTS VALPHQAHAQ ENFISPGPVA NSYNCNQTID ATHSSVYTGE QPLACDSSDY  480
RNPWPVDNFQ QDLGLVPIGF SSPSLDCHTS AAKESLPLSM VPTMGTGALV VENSSYNHHM  540
AASGNSISVA GDAHQIMSDG FYMDPDDKFV GSSFEGLPLD FIGINSPIPD LDELLDDDDL  600
MQYLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-611662909133ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1377382RKRKRR
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast03G274200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010235295.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_014757042.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_024316421.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-136EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLI1I8G10.0I1I8G1_BRADI; Uncharacterized protein
STRINGBRADI3G39970.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-134ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]