PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast03G278600.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family ERF
Protein Properties Length: 240aa    MW: 25845.9 Da    PI: 4.8442
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast03G278600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.31e-143483255
                 AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                        g +GVr++  +grW+AeIr p++   r r ++g+f  +e+Aa a++a   +l+g
  Brast03G278600.1.p 34 GLRGVRQRQ-WGRWAAEIRLPCT---RDRLWIGTFRHPEQAALAYDATLYCLYG 83
                        579***999.**********965...4********************9999976 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5103219.1773497IPR001471AP2/ERF domain
SuperFamilySSF541713.6E-153586IPR016177DNA-binding domain
PRINTSPR003677.3E-73546IPR001471AP2/ERF domain
PfamPF008478.6E-93583IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.9E-223697IPR001471AP2/ERF domain
SMARTSM003804.2E-1736103IPR001471AP2/ERF domain
CDDcd000182.77E-193699No hitNo description
PRINTSPR003677.3E-75773IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MEAKTGQAAG GASGGSVRRR GDGPGSLAPR KNLGLRGVRQ RQWGRWAAEI RLPCTRDRLW  60
IGTFRHPEQA ALAYDATLYC LYGDDKPLPP QRCYNFPAAP RPYFPPGKHG KLSHENVKAI  120
AERHAVDLYN LVNRHQNPPP APLAPPVPEE EEAAPPAAVG TFVAAAAYQP PPTPVMDMEE  180
HGVDCGADVA APAAAAAPED VGSCFFDMDD DIVYSYNVEV DAGGLIVDDN DDETWYRAM*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast03G278600.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010236752.11e-70ethylene-responsive transcription factor ERF015
TrEMBLA0A0Q3HZI42e-80A0A0Q3HZI4_BRADI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54442555
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31060.11e-22ERF family protein