PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G160900.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family EIL
Protein Properties Length: 473aa    MW: 51936.5 Da    PI: 4.8051
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G160900.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3357.23.2e-109593632316
                         XXXXXXXXXXXXXXXXXXXXXX..XXXXX....XXXXXXX.........XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                EIN3   2 elkkrmwkdqmllkrlkerkkqlledkeaa...tgakksn.........ksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipek 80 
                         +lkkrmwkdqmll +l++r   +   + +a   t++   +          +  + rrk+m raQDg+L++Ml++me+cna+GfvYg i+e 
  Brast04G160900.1.p  59 DLKKRMWKDQMLLTKLEGRAGARG-VAGPAssrTSS---SsseaglleeSPDARCRRKAMLRAQDGVLRHMLRMMEACNARGFVYGVIDEA 145
                         9******************99865.33333122333...24579***999***************************************** PP

                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHH CS
                EIN3  81 gkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepP 171
                         g+p++g+sdsLr+WWke+v+fdr+gp+ ++       +  g+s l     s   +l+++qD+tlgS+Lsal+qhc+ppqr+fple+g++pP
  Brast04G160900.1.p 146 GEPMSGSSDSLRGWWKENVSFDRAGPMGLVGP-----V--GDSPLG--LASCLYRLQDIQDSTLGSVLSALIQHCEPPQRSFPLERGLAPP 227
                         ******************************99.....3..445552..4677899************************************ PP

                         H---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS
                EIN3 172 WWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261
                         WWPtG+e wwg++g +++ qg ppy+kphdlkkawk+s+L+avikhmsp+++++r+l++qsk+lq+kmsakes ++++vl+qee++  +++
  Brast04G160900.1.p 228 WWPTGHEPWWGTQGeMQAYQGVPPYRKPHDLKKAWKISLLSAVIKHMSPRFDQMRKLVWQSKRLQQKMSAKESETWSKVLRQEEALSGRLK 318
                         *************************************************************************************999998 PP

                         XXXX....XXXXXXXXXXXXXXXXXXXX.....XXXXXX.XXXXXXXXXXXXXXXXXXXXXXXX CS
                EIN3 262 ahss....slrkqspkvtlsceqkedve.....gkkeskikhvqavkttagfpvvrkrkkkpse 316
                         a+ +       +++++ + ++++k+d e     +                    ++krk++ s+
  Brast04G160900.1.p 319 ASLQisplDDDEEEEEDKKNTGEKDDLEdvvrgV-------------------QQDKRKREVSR 363
                         8854221211112222333333333322222221...................22333333333 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.8E-11259311No hitNo description
Gene3DG3DSA:1.10.3180.101.0E-63187319IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.09E-56190313IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 473 aa     Download sequence    Send to blast
MGKGIRVKRR FSGESVMERE DAPGVPGGGP APAEDLEALQ QPEEISDSES GSESLEISDL  60
KKRMWKDQML LTKLEGRAGA RGVAGPASSR TSSSSSEAGL LEESPDARCR RKAMLRAQDG  120
VLRHMLRMME ACNARGFVYG VIDEAGEPMS GSSDSLRGWW KENVSFDRAG PMGLVGPVGD  180
SPLGLASCLY RLQDIQDSTL GSVLSALIQH CEPPQRSFPL ERGLAPPWWP TGHEPWWGTQ  240
GEMQAYQGVP PYRKPHDLKK AWKISLLSAV IKHMSPRFDQ MRKLVWQSKR LQQKMSAKES  300
ETWSKVLRQE EALSGRLKAS LQISPLDDDE EEEEDKKNTG EKDDLEDVVR GVQQDKRKRE  360
VSRSGSGSSI ENEKYPRPSA GGSGELTIML PDQLAATDPE SRSPIDELMK LYYSCIQGAG  420
ESYGDRGKEE DMAALVPPLV LGGAIDEVAH DVLFDIIGSC PEVDDVLRLM GE*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A1e-471873171130Protein ETHYLENE INSENSITIVE 3
4zds_B1e-471873171130Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
UniProtPutative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast04G160900.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHG6703060.0HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024318121.10.0ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9FJQ52e-88EIL5_ARATH; ETHYLENE INSENSITIVE 3-like 5 protein
SwissprotQ9LX162e-89EIL4_ARATH; Putative ETHYLENE INSENSITIVE 3-like 4 protein
TrEMBLA0A0Q3FK460.0A0A0Q3FK46_BRADI; Uncharacterized protein
STRINGBRADI3G46690.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65100.12e-86EIL family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Jeong HJ,Choi JY,Shin HY,Bae JM,Shin JS
    Seed-specific expression of seven Arabidopsis promoters.
    Gene, 2014. 553(1): p. 17-23
    [PMID:25261846]