PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G264700.4.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 440aa    MW: 47504.6 Da    PI: 8.0013
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G264700.4.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.94.4e-08158180426
                         XCHHHCHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKka 26 
                          k  rr+++NReAAr+sR+RKk 
  Brast04G264700.4.p 158 AKTLRRLAQNREAARKSRLRKKG 180
                         6889*****************95 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.4E-6156243No hitNo description
PROSITE patternPS000360162177IPR004827Basic-leucine zipper domain
PfamPF141443.6E-27214296IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 440 aa     Download sequence    Send to blast
MGDRPWQQPH EQLAASCSAH TGMIQASSSA AAISSIHGNI IKDPGGGYDD MAELDQALFL  60
YLNSQDQTSV QEQPQTLNIF PSRPMHVVVE PSPRTTAANP AAPNVVAAAG SSKLQTPSRP  120
APAPGNKAGK AAVKREGSGG GDGTPSTSEQ EGPRTPNAKT LRRLAQNREA ARKSRLRKKG  180
AILAGGAGIG GLSPEAAWFD GEHARWVEEH ERMMRHLRAA VELDDNHLQR PDQEEQQLRQ  240
MVDAAAAHHV VLAELKSAVA RADVFHLVSG TWLPAAERCF LWIGGSRPSD LIKVVSRHVE  300
PLTEQQVASV CDVQRWVRER EEALDQELQA ARSSLSDVVC SDALLSPYPD MAAYMAHMSL  360
AIANLSSLEA FVRQADTLRL QMLHRLPQIL TARQAARCFL AVADYSQRLR ALSSLWLARP  420
RQGQGGQPTQ PGAGGRIHP*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast04G264700.4.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010233971.10.0transcription factor TGAL9 isoform X2
SwissprotQ52MZ21e-118TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0Q3F6P50.0A0A0Q3F6P5_BRADI; Uncharacterized protein
STRINGPavir.J04905.1.p1e-167(Panicum virgatum)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.32e-77bZIP family protein