PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G342400.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 205aa    MW: 22050.5 Da    PI: 8.8679
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G342400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_141.82.3e-13132181554
                         CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                         +r+rr++kNRe+A rsR+RK+a++ eLe + ++L   N++L k+ + l+ 
  Brast04G342400.1.p 132 RRQRRMIKNRESAARSRARKQAYTNELELELAQLRRDNQMLLKRHQDLNA 181
                         69****************************************88877764 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003383.3E-9128192IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.519130183IPR004827Basic-leucine zipper domain
PfamPF001701.4E-11132181IPR004827Basic-leucine zipper domain
CDDcd147075.25E-21132184No hitNo description
Gene3DG3DSA:1.20.5.1706.7E-13132184No hitNo description
SuperFamilySSF579591.25E-10132183No hitNo description
PROSITE patternPS000360135150IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MEEEVIWRDM SSLSSTPVGA LQQQHYYMIS SPAPARGRPP PTALTLSSTL EFTYLGCAAA  60
AAAAASNSSS GDDSQLMPHS TDHPAADLDD ILISFAAASN NHTAGAGAGS NTSNTNNNNK  120
RSTIAAGGGC ERRQRRMIKN RESAARSRAR KQAYTNELEL ELAQLRRDNQ MLLKRHQDLN  180
ARLAMEVQVP DRSTLQRCRS APAP*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast04G342400.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003573205.12e-99protein FD
TrEMBLI1HVY45e-98I1HVY4_BRADI; Uncharacterized protein
STRINGBRADI3G00300.19e-99(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146021020
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.14e-22bZIP family protein