PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Brast05G015000.1.p

Organism

Brachypodium stacei

Taxonomic ID

1071399

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium

Family

bZIP

Protein Properties

Length: 424aa MW: 44831.5 Da PI: 8.4914

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Brast05G015000.1.p	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.4	5.4e-12	271	332	1	62
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +ke +r rr ++NRe+Ar+ +R+ka i+eLe+kv+eL++e + Lkke +e+ +++ +l + Brast05G015000.1.p 271 QKEAQRLRRIISNRESARKTSLRRKALIAELEKKVAELTTEKENLKKEKDEWMEKYLALLEK 332 6899***************************************************9998765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	5.6E-8	269	328	No hit	No description
SMART	SM00338	4.6E-8	271	335	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	8.8E-9	271	332	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.611	273	318	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	1.29E-7	276	327	No hit	No description
CDD	cd14702	1.38E-11	276	326	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence Send to blast
MVSASALGLT FLALVLPAAR AAAPLALPQL NPGRFRRPRA ILGGPCALLF PLDFEVEVPS 60 FPACGHRRPR RLLLTRRCPR DKPLPAPKGT DRLAENKRGD DCKGLHLDEL GRVGVGVGDG 120 VGFSVGVGVG VGDGVGFSVW VGVGVGDGVG FSVGVGDGIG FNVGVGDGVG FSVGLGVVHI 180 GSRSQIPKMA SDGQSPCRDV IAVLDSDAAA ADMAPLDAKA TSAQASHSAV PAAADQVVMA 240 IANRSPSLKW KTGVAWLQIK LTVNGSLQAE QKEAQRLRRI ISNRESARKT SLRRKALIAE 300 LEKKVAELTT EKENLKKEKD EWMEKYLALL EKQQQEAKMT QKSRPLPSLN CAMPPVPFTW 360 APLQVVAAAE EEGHHRLLPL FSTSQETTMQ AAPLRTQEPP TSSGLEDDDP CSLSLAINAP 420 SDY*

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence Send to blast

MVSASALGLT FLALVLPAAR AAAPLALPQL NPGRFRRPRA ILGGPCALLF PLDFEVEVPS  60
FPACGHRRPR RLLLTRRCPR DKPLPAPKGT DRLAENKRGD DCKGLHLDEL GRVGVGVGDG  120
VGFSVGVGVG VGDGVGFSVW VGVGVGDGVG FSVGVGDGIG FNVGVGDGVG FSVGLGVVHI  180
GSRSQIPKMA SDGQSPCRDV IAVLDSDAAA ADMAPLDAKA TSAQASHSAV PAAADQVVMA  240
IANRSPSLKW KTGVAWLQIK LTVNGSLQAE QKEAQRLRRI ISNRESARKT SLRRKALIAE  300
LEKKVAELTT EKENLKKEKD EWMEKYLALL EKQQQEAKMT QKSRPLPSLN CAMPPVPFTW  360
APLQVVAAAE EEGHHRLLPL FSTSQETTMQ AAPLRTQEPP TSSGLEDDDP CSLSLAINAP  420
SDY*

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Brast05G015000.1.p

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3165	34	75

Link Out ? help Back to Top
Phytozome	Brast05G015000.1.p