PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G165200.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family EIL
Protein Properties Length: 609aa    MW: 67376.4 Da    PI: 5.6247
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G165200.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3428.56.4e-131354131350
                         XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsL 91 
                         eel +rmwkd+++l+r+ker+++l   ++a+++++k + +++qa rkkmsra DgiLkYMlk mevcna+GfvYgiip+kgkpv+gasd++
  Brast05G165200.1.p  35 EELARRMWKDRVRLRRIKERQQKLA-LQQAELEKSKPKPISDQAMRKKMSRAHDGILKYMLKLMEVCNARGFVYGIIPDKGKPVSGASDNI 124
                         8********************9865.66777************************************************************ PP

                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHH CS
                EIN3  92 raWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwg 182
                         raWWkekv+fd+ngpaai+ky+a+nl+++++ s+   + ++ hsl++lqD+tlgSLLs+lmqhc+ppqr++plekg++pPWWP+G+e+ww 
  Brast05G165200.1.p 125 RAWWKEKVKFDKNGPAAIAKYDAENLVAADAPSS---AVKNEHSLMDLQDATLGSLLSSLMQHCNPPQRKYPLEKGTPPPWWPSGNEDWWI 212
                         *****************************98888...789*************************************************** PP

                         HHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXX......XXXX CS
                EIN3 183 elglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsah......sssl 267
                         +lgl+  q   pykkphdlkk+wkv+vLt+vikhmsp++++ir+++r+sk+lqdkm+akes ++l vl++ee++++++  +      s  +
  Brast05G165200.1.p 213 ALGLPSGQI-APYKKPHDLKKVWKVGVLTCVIKHMSPNFDKIRNHVRKSKCLQDKMTAKESLIWLGVLQREERLVHSIGNSvlaityS--S 300
                         ******999.8****************************************************************9999886543321..2 PP

                         XX...XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX................................XXXXXXXXXXXXXXXXXXXXX CS
                EIN3 268 rk...qspkvtlsceqkedvegkkeskikhvqavktta................................gfpvvrkrkkkpsesakvssk 323
                              + +  t s+++++dv+g +e   ++++++++++                                g++   krk+  ++s++++++
  Brast05G165200.1.p 301 APeygNVNGNTNSSSNEYDVDGFEEAPLSASSKDDEQDlsppaqsseehvsargrerantkhpnqdvlkaGAKERPKRKRACRSSTAIEDE 391
                         2224466677888999*****999999999999999999*******999****99999999999977777777777777666666666555 PP

                         ......XXXXXXX.XXXXXXXXXXXXX CS
                EIN3 324 evsrtcqssqfrgsetelifadknsis 350
                               q+     +++++ ++d+n+++
  Brast05G165200.1.p 392 -----VQRTDDAPENSRNLIPDMNRLD 413
                         .....4444444456778888888766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048731.1E-12435283No hitNo description
Gene3DG3DSA:1.10.3180.101.2E-68157289IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167682.88E-59163286IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0042762Biological Processregulation of sulfur metabolic process
GO:0071281Biological Processcellular response to iron ion
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 609 aa     Download sequence    Send to blast
MDQLALLATE FGDSSDFEVD GITENDVSDE EIEPEELARR MWKDRVRLRR IKERQQKLAL  60
QQAELEKSKP KPISDQAMRK KMSRAHDGIL KYMLKLMEVC NARGFVYGII PDKGKPVSGA  120
SDNIRAWWKE KVKFDKNGPA AIAKYDAENL VAADAPSSAV KNEHSLMDLQ DATLGSLLSS  180
LMQHCNPPQR KYPLEKGTPP PWWPSGNEDW WIALGLPSGQ IAPYKKPHDL KKVWKVGVLT  240
CVIKHMSPNF DKIRNHVRKS KCLQDKMTAK ESLIWLGVLQ REERLVHSIG NSVLAITYSS  300
APEYGNVNGN TNSSSNEYDV DGFEEAPLSA SSKDDEQDLS PPAQSSEEHV SARGRERANT  360
KHPNQDVLKA GAKERPKRKR ACRSSTAIED EVQRTDDAPE NSRNLIPDMN RLDHVEIPGM  420
SNQIISFNQV GVTSGSLQHR GDQGHVYLPG GGANSFDNAQ AANATPVSIY MGGQPVPYES  480
SDNARSKSGN PFPLDDDSGF NNLPGSYQTP LKQSLPLSRM DHHVVPVGIR APAVNSPYGD  540
HVTDGGNSTS VPGDMQHLID FPFYPEQDKF VGSSFEGLPL DYISISSPIP DIDDFLLHDD  600
DLMEYLGT*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A1e-6416629212138ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast05G165200.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024318458.10.0ETHYLENE INSENSITIVE 3-like 3 protein
RefseqXP_024318459.10.0ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231161e-141EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLI1IR950.0I1IR95_BRADI; Uncharacterized protein
STRINGBRADI4G33750.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP37203779
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.11e-136ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]