PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G285900.2.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 315aa    MW: 34995.4 Da    PI: 6.6901
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G285900.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.29.6e-15242287449
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                         ++r++r++kNRe+A rsR+RK+a++ eLe k   Le+eNk+Lk e 
  Brast05G285900.2.p 242 DRRQKRMIKNRESAARSRARKQAYTNELECKLSCLEEENKRLKREK 287
                         68****************************************9542 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.9E-8239295IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.852241286IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.0E-12243290No hitNo description
SuperFamilySSF579592.25E-10243288No hitNo description
PfamPF001706.3E-12243287IPR004827Basic-leucine zipper domain
CDDcd147074.52E-20243290No hitNo description
PROSITE patternPS000360246261IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    Send to blast
MSSQGGGTAV MGKRQHRDHI RTLVREGSLY NLTLSEVESH LGAPLLSMNL DDLVRSVLPD  60
DTNLPIRNGV GNSDSQSTPS SVLERQGSSI TVPPALSKKT VDEVWRDIQQ DHESSDDEER  120
SSGCETQLSL GEMTLEEFLH RVGIVTEQYQ KDANELSGRV GIGEASNLMT KVQDFPQGTS  180
PVDAFIIRQS IAQPLSVAIP STMDAIYPED QISISPSLAL SDLQTPTRKR MSSEDVVYKV  240
VDRRQKRMIK NRESAARSRA RKQAYTNELE CKLSCLEEEN KRLKREKELD RLLKSAPPPP  300
EPKKPIRRAR SASF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast05G285900.2.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578996.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
RefseqXP_010238783.10.0ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBLI1IUU30.0I1IUU3_BRADI; Uncharacterized protein
STRINGBRADI4G43850.30.0(Brachypodium distachyon)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G56850.12e-44ABA-responsive element binding protein 3