PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast07G101000.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 186aa    MW: 21292.6 Da    PI: 5.7056
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast07G101000.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_127.37.9e-0981113133
                         XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 
                         e+e++r rr ++NRe+ArrsR RK++++ +L++
  Brast07G101000.1.p  81 EEEIRRKRRVASNRESARRSRMRKQKQLGQLRD 113
                         789***************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1709.1E-678153No hitNo description
SMARTSM003380.004981145IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.31E-684140No hitNo description
PROSITE patternPS00036088103IPR004827Basic-leucine zipper domain
CDDcd147025.46E-992129No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 186 aa     Download sequence    Send to blast
MYSGEVASVL LPPVVHLPPE STVSFDRYQY NHQTAVAHDH FLFQCHGFVD DEPFPPDNPP  60
PPPDNGSTSS EEPAAEERER EEEIRRKRRV ASNRESARRS RMRKQKQLGQ LRDANRGLLD  120
RLNRAIRDCG RVVRDNSRLR DERAELRRRL RELVPVVDDD AGMESSVTTL DDNDDESRML  180
AIAYS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
184105RRKRRVASNRESARRSRMRKQK
297104RRSRMRKQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast07G101000.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU7308973e-42EU730897.1 Brachypodium distachyon clone BAC DB038O09, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229875.21e-71basic leucine zipper 43
TrEMBLA0A0Q3H6P32e-70A0A0Q3H6P3_BRADI; Uncharacterized protein
STRINGBRADI1G43660.14e-60(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15830.19e-08basic leucine-zipper 3