PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast07G171600.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 294aa    MW: 31675.7 Da    PI: 4.4232
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast07G171600.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_137.26.2e-12132178450
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                         +k+ +r ++NR +A +sR+RKk +++ Le k+k Leae ++L   l+
  Brast07G171600.1.p 132 SKKKKRQMRNRDSAMKSRERKKTYVKDLEVKSKYLEAECRRLSYALQ 178
                         699***********************************999987666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003386.6E-4128193IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.393131173IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1702.5E-11133192No hitNo description
PfamPF001701.0E-9133184IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.88E-10133191No hitNo description
CDDcd147049.35E-15134184No hitNo description
PROSITE patternPS000360136151IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0030968Biological Processendoplasmic reticulum unfolded protein response
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    Send to blast
MDADLDLEAL LASFDGESAV SDLFPPPPPD AEAGSPESVS SRSNPAGEEV LSEIERFLME  60
EEAAEAEGVD GVSVEEFFDA LFDGAEGAEK AKGSEAGGST DGDSGREEEG VEAVTPETEG  120
DVEKVDGDDP ISKKKKRQMR NRDSAMKSRE RKKTYVKDLE VKSKYLEAEC RRLSYALQCC  180
AAENVALRQS MLKDRPVGAP TAIQESAVLT ETLPLVSLLW LVSIVCLFLT PVLPNRSPVA  240
PRSVGRELVM VAGKLSSDQL ETLELLLHGR RHRGRRGRIK LDTLPFLAAA AAC*
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor involved in endoplasmic reticulum (ER) stress response (PubMed:21223397, PubMed:22050533, PubMed:22199238). Acts downstream of the ER stress sensors IRE1, BZIP39 and BZIP60 to activate BiP chaperone genes (PubMed:22050533, PubMed:22199238). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533, ECO:0000269|PubMed:22199238}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00019PBMTransfer from AT1G42990Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast07G171600.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By dithiothreitol-induced endoplasmic reticulum (ER) stress response (PubMed:22050533, PubMed:21223397). Induced by salt stress (PubMed:22050533). {ECO:0000269|PubMed:21223397, ECO:0000269|PubMed:22050533}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563606.11e-167bZIP transcription factor 50
SwissprotQ69XV01e-107BZP50_ORYSJ; bZIP transcription factor 50
TrEMBLI1GX841e-165I1GX84_BRADI; Uncharacterized protein
STRINGBRADI1G35790.11e-166(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP69343750
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G42990.15e-12basic region/leucine zipper motif 60
Publications ? help Back to Top
  1. Wakasa Y, et al.
    Expression of ER quality control-related genes in response to changes in BiP1 levels in developing rice endosperm.
    Plant J., 2011. 65(5): p. 675-89
    [PMID:21223397]
  2. Lu SJ, et al.
    Conservation of IRE1-regulated bZIP74 mRNA unconventional splicing in rice (Oryza sativa L.) involved in ER stress responses.
    Mol Plant, 2012. 5(2): p. 504-14
    [PMID:22199238]