PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast07G176700.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family ERF
Protein Properties Length: 195aa    MW: 21479.9 Da    PI: 9.2873
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast07G176700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP230.87.5e-101457451
                 AP2  4 kGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaark 51
                        +GVr    +gr+vAeI+d    + + ++++lg+f + + Aa a++ a+ 
  Brast07G176700.1.p 14 RGVRKLQ-SGRYVAEIWD----KvMGRKVWLGTFPSLKIAACAYELAAI 57
                        9***888.8*********....3344******************99986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000187.47E-161171No hitNo description
SMARTSM003802.5E-131277IPR001471AP2/ERF domain
PROSITE profilePS5103214.751271IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-111370IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.103.7E-151472IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 195 aa     Download sequence    Send to blast
MCQAFGGQPK KNLRGVRKLQ SGRYVAEIWD KVMGRKVWLG TFPSLKIAAC AYELAAIGML  60
SQGRHAIPNF EQIPPPALRD EFDEELEAQE LRYRQDGVPV PACIVRFKRV PVPPVAEFPQ  120
VPPFTVTSPG CKLTFVRSIP PAESFSIHAV EESAARNANN DPVNLSGAPT FKIRDLLKLM  180
TPADKIDALR TFGH*
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast07G176700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010229790.12e-76dehydration-responsive element-binding protein 2A
TrEMBLA0A0Q3NJI33e-75A0A0Q3NJI3_BRADI; Uncharacterized protein
STRINGBRADI1G35420.19e-76(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP4986822
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27950.14e-11cytokinin response factor 4