PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_008320_qyiu.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 375aa    MW: 41461.8 Da    PI: 6.0541
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_008320_qyiu.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.26.9e-14135186155
                         CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                         +r++h ++Er+RR+++N+ ++ +r+l+P++   + ++ + a+i+  A++Y+k+L+
  Bv1_008320_qyiu.t1 135 QRMTHIAVERNRRKQMNEYLAVIRSLMPSS---YVQRGDQASIVGGAINYVKELE 186
                         79****************************...9******************996 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.0E-13133190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000838.38E-14133190No hitNo description
SuperFamilySSF474593.14E-17133204IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.307134185IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.8E-11135186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-9140191IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MALEAVVFSQ DPLITTYNCC SSSNNNNNFG INYEFSNYYS SKIEDSFKVP FNIGLFDVNS  60
NNNNVYDYSN TSEIILENNW NNHYVPQNYS SPEHNLYLSG EAPPPSTATA ETAAGGTRRK  120
RRRRSCKNKE EVEQQRMTHI AVERNRRKQM NEYLAVIRSL MPSSYVQRGD QASIVGGAIN  180
YVKELEQLLQ SMEAEKRSDK HQRHDEHQRQ PSPPSGDDGG DRKFVGNSAD TAAWPLLFAD  240
FFSFPQYSTR SKPNSPGSGS GSGSGSGSVL GSSNSVTSSN SSVGDIEVTM VESHANVKIL  300
AKKQPKQLLK LIAGFQGLRL NVLHLNVTTV DSFVLYSLSL KVEDGCQLNS VDDIVAAANH  360
ILGQIQEEAT EDQLL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1117123RRKRRRR
2118122RKRRR
3118124RKRRRRS
4135146RMTHIAVERNRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010675612.10.0PREDICTED: transcription factor bHLH94
TrEMBLA0A0K9QUW71e-147A0A0K9QUW7_SPIOL; Uncharacterized protein
STRINGXP_010675612.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22490.17e-69bHLH family protein