PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bv1_016750_mron.t1
Organism
Beta vulgaris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta
Family bHLH
Protein Properties Length: 538aa    MW: 58590.6 Da    PI: 6.2692
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bv1_016750_mron.t1genomeTBVRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH40.64.4e-13316362354
                         HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                 HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          ++   Er+RR++ N+++++Lr l+P++     +K + a+i+  A+ YIk+L
  Bv1_016750_mron.t1 316 PKNFVTERQRRQNFNDKYQTLRGLVPNQ-----TKGDRASIVHDAISYIKEL 362
                         567889*********************9.....8****************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.126313362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.7E-10317362IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474594.71E-14318379IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.1E-10319368IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-11320376IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.46E-10322366No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009555Biological Processpollen development
GO:0048658Biological Processanther wall tapetum development
GO:0052543Biological Processcallose deposition in cell wall
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 538 aa     Download sequence    Send to blast
MYDDTEAASC FDPNNIPEVA AATANLTING NSSAIQDHGF SSHETNTMNM INNNHNNNNN  60
HIHIQESDSS MEFQNPNMGN NFSTHLLPNC NSTTDHDLNT WGPTNNVNHH NNNNNNNHEM  120
GFTHFDENMQ PTTDLLTLLH LPRCSFTSSS SSLLPPTQSL SFGKPQSPPP PPPALSFVGE  180
LNNPNMMVDN PSGSGSSTIS YDPTAAAAAA ALSYDPLFHL NLPPQPSPLL RDLMFHQTVL  240
PHTNAHGYSS GRGNGNLGNG NGNGNGNTSS LFGGMDDVEG NTINGIAGIY QDGDHHIHGN  300
GVFEFGKGDG KGGKCPKNFV TERQRRQNFN DKYQTLRGLV PNQTKGDRAS IVHDAISYIK  360
ELRTTVGELK LLLEEKRMSK ERIKRHKPDN HQDTTGGTST NGGVDNLSNG VDGAAAVVKP  420
DPDEEFKGST AIQLRSSWIQ RKCKDTEVDV RIVDDDVTIK LVQRKKINCL LTVSRNLDDL  480
HLDLRHVAGG HVGDYYSYLF NSKICEGSSV YASAIANKLI EVVERQYAAT SVAVQAKL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010691929.10.0PREDICTED: transcription factor bHLH91
TrEMBLA0A0K9R3E50.0A0A0K9R3E5_SPIOL; Uncharacterized protein
STRINGXP_010691929.10.0(Beta vulgaris)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.12e-48bHLH family protein