PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Bv1_022030_ueac.t1

Organism

Beta vulgaris

Taxonomic ID

161934

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Caryophyllales; Chenopodiaceae; Betoideae; Beta

Family

NAC

Protein Properties

Length: 387aa MW: 43712.1 Da PI: 8.5195

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Bv1_022030_ueac.t1	genome	TBVR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	155.8	1.9e-48	15	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 + pGf+F+Ptdeel+ +yLk+k+eg + + +vi+e+di+k+ePwdLp k++ ++++ew++Fs+r kky++g++++rat+ gyWkatgk++ Bv1_022030_ueac.t1 15 MFPGFKFSPTDEELILYYLKNKLEGYDKCV-QVIPELDICKYEPWDLPsKSIIKSDEEWFYFSPRGKKYPNGSQSKRATEIGYWKATGKER 104 579**********************777.99***********777777899****************************** PP NAM 91 evlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +v+s ++ ++g+k+tLvf+ grapkge+t+W+mhey + Bv1_022030_ueac.t1 105 AVKS-GSIVIGTKRTLVFHIGRAPKGERTEWIMHEYCV 141 9.9*****************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF101941	2.62E-55	11	157	IPR003441	NAC domain
PROSITE profile	PS51005	52.221	15	157	IPR003441	NAC domain
Pfam	PF02365	8.8E-24	17	140	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009626	Biological Process	plant-type hypersensitive response
GO:0009910	Biological Process	negative regulation of flower development
GO:0034976	Biological Process	response to endoplasmic reticulum stress
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0005783	Cellular Component	endoplasmic reticulum
GO:0003677	Molecular Function	DNA binding
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence Send to blast
MDGKEAERLI AASSMFPGFK FSPTDEELIL YYLKNKLEGY DKCVQVIPEL DICKYEPWDL 60 PSKSIIKSDE EWFYFSPRGK KYPNGSQSKR ATEIGYWKAT GKERAVKSGS IVIGTKRTLV 120 FHIGRAPKGE RTEWIMHEYC VSGKGQDALV VCRLRRKNDY YNSMNDGTNG HIQSSNPSLL 180 MATSGIYSGC DMDHLTSTSH KDRMAECSFK RTSSSNDSHS VEQMDSAFQS DLKTKDEIVQ 240 QQCASHHFAN EDDLFAEILN DSIVQLDECL APTPISTFGP VVTSTTIVPV IPRVPNTLHL 300 SVTPRVCPSQ GTANRRIRLK RLRRCSSRKE QLEEGTGENM VPSESKQVLR KDRMRLLKKC 360 CRLYIVLITM ALVILMLAHG ISPAYYV

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence Send to blast

MDGKEAERLI AASSMFPGFK FSPTDEELIL YYLKNKLEGY DKCVQVIPEL DICKYEPWDL  60
PSKSIIKSDE EWFYFSPRGK KYPNGSQSKR ATEIGYWKAT GKERAVKSGS IVIGTKRTLV  120
FHIGRAPKGE RTEWIMHEYC VSGKGQDALV VCRLRRKNDY YNSMNDGTNG HIQSSNPSLL  180
MATSGIYSGC DMDHLTSTSH KDRMAECSFK RTSSSNDSHS VEQMDSAFQS DLKTKDEIVQ  240
QQCASHHFAN EDDLFAEILN DSIVQLDECL APTPISTFGP VVTSTTIVPV IPRVPNTLHL  300
SVTPRVCPSQ GTANRRIRLK RLRRCSSRKE QLEEGTGENM VPSESKQVLR KDRMRLLKKC  360
CRLYIVLITM ALVILMLAHG ISPAYYV

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
1ut4_A	1e-43	14	158	16	166	NO APICAL MERISTEM PROTEIN
1ut4_B	1e-43	14	158	16	166	NO APICAL MERISTEM PROTEIN
1ut7_A	1e-43	14	158	16	166	NO APICAL MERISTEM PROTEIN
1ut7_B	1e-43	14	158	16	166	NO APICAL MERISTEM PROTEIN
3swm_A	1e-43	14	158	19	169	NAC domain-containing protein 19
3swm_B	1e-43	14	158	19	169	NAC domain-containing protein 19
3swm_C	1e-43	14	158	19	169	NAC domain-containing protein 19
3swm_D	1e-43	14	158	19	169	NAC domain-containing protein 19
3swp_A	1e-43	14	158	19	169	NAC domain-containing protein 19
3swp_B	1e-43	14	158	19	169	NAC domain-containing protein 19
3swp_C	1e-43	14	158	19	169	NAC domain-containing protein 19
3swp_D	1e-43	14	158	19	169	NAC domain-containing protein 19
4dul_A	1e-43	14	158	16	166	NAC domain-containing protein 19
4dul_B	1e-43	14	158	16	166	NAC domain-containing protein 19
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_010692712.1	0.0	PREDICTED: NAC domain-containing protein 89 isoform X2
TrEMBL	A0A0K9RI70	1e-174	A0A0K9RI70_SPIOL; Uncharacterized protein
STRING	XP_010692710.1	0.0	(Beta vulgaris)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22290.1	1e-83	NAC domain containing protein 89